RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 OCLNQ16625 522 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 SMN1Q16637 294 aaKnown RBP12.28□□□□□ -0.44
VAPB-202ENST00000395802 NADK2Q4G0N4 442 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
VAPB-202ENST00000395802 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
VAPB-202ENST00000395802 BPIFB6Q8NFQ5 453 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 SGCDQ92629 289 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 PNPLA2Q96AD5 504 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAPB-202ENST00000395802 TP53TG5Q9Y2B4 290 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 IER3IP1Q9Y5U9 82 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
VAPB-202ENST00000395802 AQP7P3A6NL99 342 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 TNFSF11O14788 317 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 AKR7A3O95154 331 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 TXNDC12O95881 172 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 IGHG3P01860 377 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 OPN1LWP04000 364 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 F13BP05160 661 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 ZNF708P17019 499 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 ENPP1P22413 925 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 ALDH3B2P48448 385 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 AGFG1P52594 562 aaKnown RBP12.27□□□□□ -0.44
VAPB-202ENST00000395802 EFNB1P98172 346 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 VASNQ6EMK4 673 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 ZNF773Q6PK81 442 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 GGNQ86UU5 652 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 JAZF1Q86VZ6 243 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 UEVLDQ8IX04 471 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 LRRC75AQ8NAA5 344 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 MOSPD2Q8NHP6 518 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 LRR1Q96L50 414 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 OXGR1Q96P68 337 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 IL4I1Q96RQ9 567 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 MFRPQ9BY79 579 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 DEFB127Q9H1M4 99 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 SLC6A15Q9H2J7 730 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 TXNIPQ9H3M7 391 aa12.27□□□□□ -0.44
VAPB-202ENST00000395802 RPL36Q9Y3U8 105 aaKnown RBP12.27□□□□□ -0.44
VAPB-202ENST00000395802 A0A0J9YW62 118 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 A6NIZ1 184 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 PRR23D1E9PI22 279 aaPredicted RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 C11orf98E9PRG8 122 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 M0R129 80 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 IGHMP01871 453 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 PDGFAP04085 211 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 CELA3AP09093 270 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 PRR23D2P0DMB1 279 aaPredicted RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 ZNF43P17038 809 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 EEF1B2P24534 225 aaKnown RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 LHX2P50458 406 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 RAP1BP61224 184 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 RAP1AP62834 184 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 ERVK-25P63136 954 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 SLC35A2P78381 396 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 H3F3AP84243 136 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 TMEM201Q5SNT2 666 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 NXNL2Q5VZ03 156 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 TRILQ7L0X0 811 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 ADCK1Q86TW2 530 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 GID4Q8IVV7 300 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 PM20D2Q8IYS1 436 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 IPCEF1Q8WWN9 437 aaPredicted RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 SARAFQ96BY9 339 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 DNAJA3Q96EY1 480 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 SF3B5Q9BWJ5 86 aaKnown RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 FAM192AQ9GZU8 254 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 DUSP21Q9H596 190 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 CCNB1IP1Q9NPC3 277 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.45
VAPB-202ENST00000395802 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.45
VAPB-202ENST00000395802 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 IRGMA1A4Y4 181 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 MS4A18H0YCH9 400 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 AQP7O14520 342 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 PRKYO43930 277 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 BCL10O95999 233 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 CPN1P15169 458 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 ACVR2AP27037 513 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 SHC1P29353 583 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 CLDN20P56880 219 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 RPL27P61353 136 aaKnown RBP12.26□□□□□ -0.45
VAPB-202ENST00000395802 TMED1Q13445 227 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
VAPB-202ENST00000395802 MS4A18Q3C1V0 323 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 GXYLT1Q4G148 440 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 SLC35F1Q5T1Q4 408 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 FAM180AQ6UWF9 173 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 FAM122BQ7Z309 247 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 GPAT4Q86UL3 456 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 IGFN1Q86VF2 1251 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 OR52E2Q8NGJ4 325 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 OR10D3Q8NH80 312 aa12.26□□□□□ -0.45
VAPB-202ENST00000395802 ADGRG7Q96K78 797 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms