RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TLCD1Q96CP7 247 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 ZNF317Q96PQ6 595 aaPredicted RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 KCNA7Q96RP8 456 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 MOV10Q9HCE1 1003 aaKnown RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 MID1IP1Q9NPA3 183 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 FZR1Q9UM11 496 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 TRAPPC4Q9Y296 219 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 TIMM22Q9Y584 194 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 BIRC5O15392 142 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 EIF1BO60739 113 aaKnown RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 UPK3AO75631 287 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 GPANK1O95872 356 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 CHEK2O96017 543 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 BPGMP07738 259 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 UBTFL6P0CB48 400 aaPredicted RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 SELEP16581 610 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 EFNA1P20827 205 aaPredicted RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 SELENOPP49908 381 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 ATP4BP51164 291 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 SLC35A1P78382 337 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 TAF9Q16594 264 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 ZNF362Q5T0B9 420 aaPredicted RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 JAZF1Q86VZ6 243 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 ADGRG3Q86Y34 549 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 ZFP28Q8NHY6 868 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 RAB8BQ92930 207 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 FAM120BQ96EK7 910 aaKnown RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
SNX1-214ENST00000625244 MECRQ9BV79 373 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 KRTAP17-1Q9BYP8 105 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 GSTO2Q9H4Y5 243 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
SNX1-214ENST00000625244 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 LOC100653049A0A140TA62 436 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 CLPSL1A2RUU4 121 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 WDR91A4D1P6 747 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 TMEM229AB2RXF0 380 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 NPHS1O60500 1241 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 KRT34O76011 436 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 BCKDHAP12694 445 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 FRKP42685 505 aaPredicted RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 ETV4P43268 484 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 RAD52P43351 418 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 CLK1P49759 484 aaKnown RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 SLC18A1P54219 525 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 ALKBH6Q3KRA9 238 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 NOXRED1Q6NXP6 359 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 MDP1Q86V88 176 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 MRAPQ8TCY5 172 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 MGARPQ8TDB4 240 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 GATA5Q9BWX5 397 aaPredicted RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 ZNF385DQ9H6B1 395 aa11.81□□□□□ -0.52
SNX1-214ENST00000625244 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 LEF1Q9UJU2 399 aaPredicted RBP11.81□□□□□ -0.52
SNX1-214ENST00000625244 SERTM1A2A2V5 107 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 NPIPB8E9PQR5 432 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 ANKRD28O15084 1053 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 BCAS1O75363 584 aaPredicted RBP11.8□□□□□ -0.52
SNX1-214ENST00000625244 RSL1D1O76021 490 aaKnown RBP11.8□□□□□ -0.52
SNX1-214ENST00000625244 NGFP01138 241 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 SERPINE1P05121 402 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 ARR3P36575 388 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 CCL8P80075 99 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 HLXQ14774 488 aaPredicted RBP11.8□□□□□ -0.52
SNX1-214ENST00000625244 CHI3L2Q15782 390 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 PAQR6Q6TCH4 344 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 ZCCHC23Q6ZST2 131 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 GRINAQ7Z429 371 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 REC114Q7Z4M0 266 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 TMEM99Q8N816 258 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 IL17RDQ8NFM7 739 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 ZNF563Q8TA94 476 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 FAM76AQ8TAV0 307 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
SNX1-214ENST00000625244 SERHL2Q9H4I8 314 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 SIRT3Q9NTG7 399 aaPredicted RBP11.8□□□□□ -0.52
SNX1-214ENST00000625244 C1RLQ9NZP8 487 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 AUP1Q9Y679 476 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 CACNG2Q9Y698 323 aa11.8□□□□□ -0.52
SNX1-214ENST00000625244 PPIAL4EA0A075B759 164 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 PPIAL4CA0A0B4J2A2 164 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 MDFIC2A0A1B0GVS7 189 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 TMEM114B3SHH9 223 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
SNX1-214ENST00000625244 ATP8B1O43520 1251 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 AKAP10O43572 662 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 CSTAP01040 98 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 PPIAL4FP0DN26 164 aa11.79□□□□□ -0.52
SNX1-214ENST00000625244 UROSP10746 265 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms