RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ZNF836Q6ZNA1 936 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 EPHX4Q8IUS5 362 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC38A5Q8WUX1 472 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 MSI2Q96DH6 328 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ITCHQ96J02 903 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 TPT1P8Q9HAU6 139 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF443Q9Y2A4 671 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ARFGEF3Q5TH69 2177 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 FRS3O43559 492 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 LY6HO94772 140 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 LGI1O95970 557 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 GIFP27352 417 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 SELENOPP49908 381 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 MVDP53602 400 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 NME5P56597 212 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 POU3F1Q03052 451 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 ADIPOQQ15848 244 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 TNFAIP8L3Q5GJ75 292 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 FAM120AOSQ5T036 256 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 HHATQ5VTY9 493 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 VRK2Q86Y07 508 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 C3orf49Q96BT1 292 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 OXGR1Q96P68 337 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 C19orf24Q9BVV8 132 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 PRR14Q9BWN1 585 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 BCL2L10Q9HD36 194 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 ZIM2Q9NZV7 527 aa15.49■□□□□ 0.07
SHKBP1-227ENST00000602011 MALRD1Q5VYJ5 2156 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 TMEM229AB2RXF0 380 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 FZD7O75084 574 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC43A1O75387 559 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 TGFAP01135 160 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 PCMT1P22061 227 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 IGFBP5P24593 272 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 MFSD13AQ14CX5 517 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 MAPK11Q15759 364 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 ATG16L1Q676U5 607 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 PIK3C3Q8NEB9 887 aa15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 PNPT1Q8TCS8 783 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-227ENST00000602011 FTCDNL1E5RQL4 147 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 HAX1O00165 279 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 UPK3AO75631 287 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF432O94892 652 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 STAMBPO95630 424 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 BCHEP06276 602 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 CECR9P0C854 216 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 PNMTP11086 282 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 ETFAP13804 333 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 NPR2P20594 1047 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 EPHA3P29320 983 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 EVX1P49640 407 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 CHN2P52757 468 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 ROR2Q01974 943 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 BNIP2Q12982 314 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 FADDQ13158 208 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 C1DQ13901 141 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF311Q5JNZ3 666 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 C6orf89Q6UWU4 347 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 SNX32Q86XE0 403 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 CLIP4Q8N3C7 705 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 GPR137CQ8N3F9 429 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 LSMEM1Q8N8F7 131 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 DNAJA4Q8WW22 397 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 ALKBH3Q96Q83 286 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 DOK1Q99704 481 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 PAIP2Q9BPZ3 127 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 DENND2DQ9H6A0 471 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 SDR39U1Q9NRG7 319 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 RPS6KB2Q9UBS0 482 aa15.47■□□□□ 0.07
SHKBP1-227ENST00000602011 IGHV4-61A0A0C4DH41 118 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 AIM2O14862 343 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 C1QCP02747 245 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 TACSTD2P09758 323 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 ETS2P15036 469 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC18A1P54219 525 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 MPP2Q14168 576 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 CARTPTQ16568 116 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 FAM69AQ5T7M9 428 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF786Q8N393 782 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 RFLNBQ8N5W9 214 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 OR6S1Q8NH40 331 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 BBS10Q8TAM1 723 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC38A4Q969I6 547 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC25A36Q96CQ1 311 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 TMEM19Q96HH6 336 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 MAELQ96JY0 434 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 LRR1Q96L50 414 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 WDR55Q9H6Y2 383 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 EVA1AQ9H8M9 152 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 CHODLQ9H9P2 273 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 USP22Q9UPT9 525 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 SPEF1Q9Y4P9 236 aa15.46■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC35F4A4IF30 521 aa15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 SNNO75324 88 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 BMP2P12643 396 aa15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 DAOP14920 347 aa15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 CLDN17P56750 224 aa15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-227ENST00000602011 CEP85LQ5SZL2 805 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms