RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 JKAMPQ9P055 326 aa13.17□□□□□ -0.3
RIOK3-210ENST00000584960 ING1Q9UK53 422 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-210ENST00000584960 PROCRQ9UNN8 238 aa13.17□□□□□ -0.3
RIOK3-210ENST00000584960 TESMINQ9Y4I5 508 aa13.17□□□□□ -0.3
RIOK3-210ENST00000584960 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-210ENST00000584960 SH3PXD2BA1X283 911 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 ZNF814B7Z6K7 855 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 MS4A18H0YCH9 400 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 KPNA4O00629 521 aaPredicted RBP13.16□□□□□ -0.3
RIOK3-210ENST00000584960 PLPP3O14495 311 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 GNGT2O14610 69 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
RIOK3-210ENST00000584960 CST1P01037 141 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 IFI30P13284 250 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 ZNF43P17038 809 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 ASCL1P50553 236 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 ACTR3P61158 418 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 PUDPQ08623 228 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 TAF11Q15544 211 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 MS4A18Q3C1V0 323 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 FBXL19-AS1Q494R0 122 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 BTLAQ7Z6A9 289 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 LIX1LQ8IVB5 337 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 NRMQ8IXM6 262 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 FUZQ9BT04 418 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 ARMC1Q9NVT9 282 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
RIOK3-210ENST00000584960 NOX1Q9Y5S8 564 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 FLVCR1Q9Y5Y0 555 aa13.16□□□□□ -0.3
RIOK3-210ENST00000584960 HCFC1P51610 2035 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 OR6C65A6NJZ3 312 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 HNRNPRO43390 633 aaKnown RBP13.15□□□□□ -0.3
RIOK3-210ENST00000584960 AKAP8O43823 692 aaKnown RBP13.15□□□□□ -0.3
RIOK3-210ENST00000584960 FKBP6O75344 327 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 CGAP01215 116 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 KLK2P20151 261 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 PEX19P40855 299 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 LIMS1P48059 325 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 SIRPAP78324 504 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
RIOK3-210ENST00000584960 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
RIOK3-210ENST00000584960 CREB3L2Q70SY1 520 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 NANOGNBQ7Z5D8 188 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 ELOVL5Q9NYP7 299 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 DNAJB9Q9UBS3 223 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 DOPEY1Q5JWR5 2465 aa13.15□□□□□ -0.3
RIOK3-210ENST00000584960 FLNCQ14315 2725 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 FREM1Q5H8C1 2179 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 A8MXE2 369 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 LRRN3E7EW58 273 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 RAMP1O60894 148 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 MRPL33O75394 65 aaKnown RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 DEAF1O75398 565 aaPredicted RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 TSPAN19P0C672 248 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 ADORA3P0DMS8 318 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 SAGP10523 405 aaPredicted RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 FCGR1AP12314 374 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 PTNP21246 168 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 CBLP22681 906 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 OR3A2P47893 321 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 CCNIQ14094 377 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 ZFP1Q6P2D0 407 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 VWA1Q6PCB0 445 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 BEND4Q6ZU67 534 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 LRRC17Q8N6Y2 441 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 RELL2Q8NC24 303 aaPredicted RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 SLCO4A1Q96BD0 722 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
RIOK3-210ENST00000584960 SAMHD1Q9Y3Z3 626 aaKnown RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 USP9XQ93008 2570 aaPredicted RBP13.14□□□□□ -0.31
RIOK3-210ENST00000584960 FAM90A27PA6NNH2 459 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 OR10H3O60404 316 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 SMNDC1O75940 238 aaKnown RBP eCLIP13.13□□□□□ -0.31
RIOK3-210ENST00000584960 CCNB2O95067 398 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 FUT4P22083 530 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 AHCYP23526 432 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 DNAJA1P31689 397 aaKnown RBP13.13□□□□□ -0.31
RIOK3-210ENST00000584960 OMPP47874 163 aa13.13□□□□□ -0.31
RIOK3-210ENST00000584960 PRPS1P60891 318 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms