RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 COMTD1Q86VU5 262 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 BCL2L2Q92843 193 aaPredicted RBP13.87□□□□□ -0.19
CRLF3-203ENST00000578692 SLC38A4Q969I6 547 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 SLC47A1Q96FL8 570 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 SEC14L4Q9UDX3 406 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
CRLF3-203ENST00000578692 PRORSD1PA6NEY8 169 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 HMGB1P1B2RPK0 211 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 ATP6V1G2-DDX39BF2Z307 99 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 AIM2O14862 343 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 FZD7O75084 574 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 SERPINB7O75635 380 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 TP53P04637 393 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 UBE2NP61088 152 aaKnown RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 CHRNB3Q05901 458 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 ADRM1Q16186 407 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 FAM91A1Q658Y4 838 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 HMBOX1Q6NT76 420 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 HDXQ7Z353 690 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 HIPK4Q8NE63 616 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 BHLHE22Q8NFJ8 381 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 RNF217Q8TC41 542 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 THOC1Q96FV9 657 aaKnown RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 MAGEB18Q96M61 343 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 ALKBH3Q96Q83 286 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 TMEM27Q9HBJ8 222 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 SELENONQ9NZV5 590 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 B3GAT1Q9P2W7 334 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 TESQ9UGI8 421 aaKnown RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 LEF1Q9UJU2 399 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 PMF1-BGLAPU3KQ54 211 aa13.86□□□□□ -0.19
CRLF3-203ENST00000578692 NSD1Q96L73 2696 aaPredicted RBP13.86□□□□□ -0.19
CRLF3-203ENST00000578692 CR1P17927 2039 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 TRAV36DV7A0A075B6V5 113 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 IGHV1-18A0A0C4DH31 117 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 H7C417 338 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 M0R082 166 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF432O94892 652 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 CBLP22681 906 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 AQP1P29972 269 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 GRPRP30550 384 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 RGS8P57771 180 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 DSCR9P59020 149 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 NCALDP61601 193 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ROR2Q01974 943 aaKnown RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 DMTNQ08495 405 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 C1DQ13901 141 aaKnown RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 OR1Q1Q15612 314 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ANKRD16Q6P6B7 361 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 H1FNTQ75WM6 255 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ARMC8Q8IUR7 673 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ANKK1Q8NFD2 765 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 OR10H5Q8NGA6 315 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF417Q8TAU3 575 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 MAGEE2Q8TD90 523 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 STON2Q8WXE9 905 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 HTRA1Q92743 480 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF317Q96PQ6 595 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 SLC38A2Q96QD8 506 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 ZNF587Q96SQ5 575 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 KCNS3Q9BQ31 491 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 CPPED1Q9BRF8 314 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-203ENST00000578692 EVA1AQ9H8M9 152 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 SLC13A4Q9UKG4 626 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 NDUFAF1Q9Y375 327 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 CSPG4Q6UVK1 2322 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 HIVEP2P31629 2446 aa13.85□□□□□ -0.19
CRLF3-203ENST00000578692 IGKV1D-42A0A075B6H8 117 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 IGHV4-30-2A0A087WSY4 118 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 A0A087WUJ7 227 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 A0A096LPE4 126 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 ARPC4-TTLL3A0A0A6YYG9 625 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 LOC102725191A0A1B0GVB3 256 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 A0A1W2PPZ6 126 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 MS4A18H0YCH9 400 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 TPST2O60704 377 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 SLC43A1O75387 559 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 CRLF1O75462 422 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 MFN2O95140 757 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 IL1RL1Q01638 556 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 MFSD13AQ14CX5 517 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 MS4A18Q3C1V0 323 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 CLEC2AQ6UVW9 174 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 OR6S1Q8NH40 331 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 WFDC6Q9BQY6 131 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 ANGPT4Q9Y264 503 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 ALPK2Q86TB3 2170 aa13.84□□□□□ -0.19
CRLF3-203ENST00000578692 A0A0B4J2E0 115 aa13.83□□□□□ -0.19
CRLF3-203ENST00000578692 A0A1B0GX12 115 aa13.83□□□□□ -0.19
CRLF3-203ENST00000578692 KIAA1324LA8MWY0 1029 aaPredicted RBP13.83□□□□□ -0.19
CRLF3-203ENST00000578692 CD5LO43866 347 aa13.83□□□□□ -0.19
CRLF3-203ENST00000578692 CRYAAP02489 173 aa13.83□□□□□ -0.19
CRLF3-203ENST00000578692 SH3BGRP55822 239 aaPredicted RBP13.83□□□□□ -0.19
CRLF3-203ENST00000578692 TUBA1BP68363 451 aa13.83□□□□□ -0.19
CRLF3-203ENST00000578692 TUBA4AP68366 448 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms