RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PCDHA9Q9Y5H5 950 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 PTPRJQ12913 1337 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 SEMA4FO95754 770 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 IGSF6O95976 241 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 INPP5JQ15735 1006 aaPredicted RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 DPPA3Q6W0C5 159 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 OAFQ86UD1 273 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 RTN4RL1Q86UN2 441 aaPredicted RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 APCDD1Q8J025 514 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 OR52R1Q8NGF1 315 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 MITD1Q8WV92 249 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 FDXACB1Q9BRP7 624 aaPredicted RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 SGPP1Q9BX95 441 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 H0YIV9 168 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 J3QR89 54 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 KCNAB3O43448 404 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 FCMRO60667 390 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 HPXP02790 462 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 PGA3P0DJD8 388 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 IL2RGP31785 369 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 LSM6P62312 80 aaKnown RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 FOXK1P85037 733 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 GPR18Q14330 331 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 ENPP7Q6UWV6 458 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 GDPGP1Q6ZNW5 385 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 OVCH1Q7RTY7 1134 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 CTU1Q7Z7A3 348 aaKnown RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 PTRH1Q86Y79 214 aaKnown RBP8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 SELENOIQ9C0D9 397 aa8.36□□□□□ -1.07
GTF2A1-203ENST00000553612 CPS1P31327 1500 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 BORCS7-ASMTA0A0B4J1R7 106 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 EIF4EP06730 217 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CXCR1P25024 350 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 UCP1P25874 307 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SHC1P29353 583 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 MC4RP32245 332 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 FHITP49789 147 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 EMX2Q04743 252 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 DPYSL2Q16555 572 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 WBP2NLQ6ICG8 309 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TUSC5Q8IXB3 177 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR6V1Q8N148 313 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RSPRY1Q96DX4 576 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC35G5Q96KT7 338 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 NIPSNAP3BQ9BS92 247 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TM6SF2Q9BZW4 377 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RAI2Q9Y5P3 530 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GABRR3A8MPY1 467 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ITGB1BP1O14713 200 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PPP1R11O60927 126 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 USF1P22415 310 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GPR3P46089 330 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PLP1P60201 277 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PPIAP62937 165 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TSPAN31Q12999 210 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 UPP1Q16831 310 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GSG1Q2KHT4 349 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SOWAHAQ2M3V2 549 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 NKAIN2Q5VXU1 208 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ACER1Q8TDN7 264 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RAB11FIP5Q9BXF6 653 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 DUSP21Q9H596 190 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 AUNIPQ9H7T9 357 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 LMAN1LQ9HAT1 526 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 MKKSQ9NPJ1 570 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 MMP26Q9NRE1 261 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 LAMP3Q9UQV4 416 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 DNAJC15Q9Y5T4 150 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GABRPO00591 440 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TRAF3IP2O43734 574 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 NAXDQ8IW45 347 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RCBTB1Q8NDN9 531 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR4K1Q8NGD4 311 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TMEM163Q8TC26 289 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RAB8BQ92930 207 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SEMA3CQ99985 751 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CDC42BPBQ9Y5S2 1711 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ZNF891A8MT65 544 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PEX11BO96011 259 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GPX3P22352 226 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 RPS13P62277 151 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ACSM1Q08AH1 577 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ADIRFQ15847 76 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 KCTD11Q693B1 232 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CLDN22Q8N7P3 220 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ARL14EPQ8N8R7 260 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR4K2Q8NGD2 314 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR1J1Q8NGS3 322 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CABLES2Q9BTV7 478 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GTSF1LQ9H1H1 148 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CDT1Q9H211 546 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 GDE1Q9NZC3 331 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SS18L2Q9UHA2 77 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC7A7Q9UM01 511 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms