RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PIF1Q9H611 641 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 TCF7L2Q9NQB0 619 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 SEC14L4Q9UDX3 406 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 AMDHD2Q9Y303 409 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 IFT52Q9Y366 437 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
GABPB1-206ENST00000543881 TRBV5-3A0A0A0MS03 114 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 TMEM247A6NEH6 219 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 UPK3AO75631 287 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 LGI1O95970 557 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 HTR2AP28223 471 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 RPS5P46782 204 aaKnown RBP10.34□□□□□ -0.75
GABPB1-206ENST00000543881 EFNA4P52798 201 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 FADDQ13158 208 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 SQLEQ14534 574 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 PRAMEF8Q5VWM4 474 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 PRAMEF7Q5VXH5 474 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 GOLGA6L1Q8N7Z2 621 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 MFSD8Q8NHS3 518 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 NFKBIDQ8NI38 313 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 BBS10Q8TAM1 723 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 MSI2Q96DH6 328 aaKnown RBP10.34□□□□□ -0.75
GABPB1-206ENST00000543881 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 IKZF5Q9H5V7 419 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 CCDC167Q9P0B6 97 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 VAPAQ9P0L0 249 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 ATP23Q9Y6H3 246 aa10.34□□□□□ -0.75
GABPB1-206ENST00000543881 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 NR5A2O00482 541 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 POLR3GO15318 223 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-206ENST00000543881 SPRY1O43609 319 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-206ENST00000543881 TPST1O60507 370 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 FZD7O75084 574 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 LY6HO94772 140 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 VAMP5O95183 116 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 TGDSO95455 350 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ARAFP10398 606 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 PNMTP11086 282 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ETS2P15036 469 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 PRPS1P60891 318 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 STX1BP61266 288 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 GGTLC2Q14390 218 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 TBRG1Q3YBR2 411 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ZNF544Q6NX49 715 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 NIPAL3Q6P499 406 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 C6orf89Q6UWU4 347 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 OR1K1Q8NGR3 316 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 BCL2L2Q92843 193 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-206ENST00000543881 SLC35B4Q969S0 331 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 SLC25A36Q96CQ1 311 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 SPDL1Q96EA4 605 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ALKBH3Q96Q83 286 aaPredicted RBP10.33□□□□□ -0.76
GABPB1-206ENST00000543881 NELFAQ9H3P2 528 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 RAD21L1Q9H4I0 556 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 ARMC7Q9H6L4 198 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 B3GAT1Q9P2W7 334 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 MOKQ9UQ07 419 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 RASD1Q9Y272 281 aa10.33□□□□□ -0.76
GABPB1-206ENST00000543881 IGKV1D-42A0A075B6H8 117 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 A0A1B0GWA3 101 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 VWC2LB2RUY7 222 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 TCF21O43680 179 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 AHSA1O95433 338 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 PRKAR1BP31321 381 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 MST1LQ2TV78 715 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 TTMPQ5BVD1 217 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 GCNT6Q5T4J0 391 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 C12orf54Q6X4T0 127 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 MEX3DQ86XN8 651 aaKnown RBP10.32□□□□□ -0.76
GABPB1-206ENST00000543881 LSMEM1Q8N8F7 131 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 LRRC8CQ8TDW0 803 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 TAAR8Q969N4 342 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 C1orf159Q96HA4 380 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 WFDC6Q9BQY6 131 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 CCDC28BQ9BUN5 200 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 FKRPQ9H9S5 495 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 CACYBPQ9HB71 228 aaKnown RBP10.32□□□□□ -0.76
GABPB1-206ENST00000543881 TMEM45AQ9NWC5 275 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 GMEB1Q9Y692 573 aa10.32□□□□□ -0.76
GABPB1-206ENST00000543881 C5orf58C9J3I9 102 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 ZNF587BE7ETH6 402 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 TPST2O60704 377 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 KRT33AO76009 404 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 ZNF432O94892 652 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 WNT11O96014 354 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 TGFAP01135 160 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 BMP4P12644 408 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 APEHP13798 732 aaKnown RBP10.31□□□□□ -0.76
GABPB1-206ENST00000543881 GPX2P18283 190 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 CFPP27918 469 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 APOBEC3AP31941 199 aaPredicted RBP10.31□□□□□ -0.76
GABPB1-206ENST00000543881 NR4A2P43354 598 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 AQP5P55064 265 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 CLDN17P56750 224 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 TUBA1BP68363 451 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 TUBA4AP68366 448 aa10.31□□□□□ -0.76
GABPB1-206ENST00000543881 CDK6Q00534 326 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms