RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 HSP90AA4PQ58FG1 418 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 FBXO48Q5FWF7 155 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 REEP3Q6NUK4 255 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 C2orf66Q6UXQ4 117 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 STXBP4Q6ZWJ1 553 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 ARCQ7LC44 396 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 LINC00523Q86TU6 105 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 KIF27Q86VH2 1401 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 MITD1Q8WV92 249 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 C19orf60Q96EN9 201 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 HSFY1Q96LI6 401 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 ATP5SQ99766 215 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 SH3GL1Q99961 368 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 MRPL45Q9BRJ2 306 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 HAUS4Q9H6D7 363 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 ISG20L2Q9H9L3 353 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 LYRM4Q9HD34 91 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 BICRAQ9NZM4 1560 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 STAP1Q9ULZ2 295 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 MOB4Q9Y3A3 225 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 FANCIQ9NVI1 1328 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 FRMPD3Q5JV73 1810 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 TRAV9-2A0A087WT02 112 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 NSG1A0A0A6YYJ2 146 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 KBTBD11-OT1A0A1B0GTJ5 212 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 H7C423 109 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 WWP2O00308 870 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 GOSR2O14653 212 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 EIF3HO15372 352 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 GPAA1O43292 621 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 CSTAP01040 98 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 KLK3P07288 261 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 IVLP07476 585 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 ANXA5P08758 320 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 UBTFL6P0CB48 400 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 PGAM2P15259 253 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 TBPP20226 339 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 VDAC1P21796 283 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 NTSP30990 170 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 NSG1P42857 185 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 SLC1A1P43005 524 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 BCAP31P51572 246 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 CCNHP51946 323 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 BIDP55957 195 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 LMO4P61968 165 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 ERVK-25P63136 954 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 MS4A2Q01362 244 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 STK38Q15208 465 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 TGIF1Q15583 401 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 STK11Q15831 433 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 QRICH1Q2TAL8 776 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 HSDL1Q3SXM5 330 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR2G6Q5TZ20 316 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 SLC22A10Q63ZE4 541 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 TTC23LQ6PF05 361 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 WDR74Q6RFH5 385 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 FRA10AC1Q70Z53 315 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 TIPARPQ7Z3E1 657 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 HIPK1Q86Z02 1210 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 LIX1Q8N485 282 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 ACOT4Q8N9L9 421 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 DTX3LQ8TDB6 740 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 FGGYQ96C11 551 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 FAIM2Q9BWQ8 316 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 SELENOIQ9C0D9 397 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 PXMP2Q9NR77 195 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 SAMSN1Q9NSI8 373 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 GIN1Q9NXP7 522 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 AHSPQ9NZD4 102 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 DHRS4-AS1Q9P1J3 65 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 UXTQ9UBK9 157 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 CLN8Q9UBY8 286 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 DCDC2Q9UHG0 476 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 CFAP45Q9UL16 551 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 UNC13AQ9UPW8 1703 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 WDR81Q562E7 1941 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 PIK3R4Q99570 1358 aa3.03□□□□□ -1.92
TRAPPC13-208ENST00000505553 KCNE1BA0A087WTH5 132 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 GABRR3A8MPY1 467 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 CCL21O00585 134 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 CHST1O43916 411 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 GALR3O60755 368 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 BBOX1O75936 387 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 SNAI1O95863 264 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 HOXD4P09016 255 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 NPR2P20594 1047 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 SLC2A5P22732 501 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 SHMT2P34897 504 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 LONP1P36776 959 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 TFPI2P48307 235 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 TMED10P49755 219 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 CRIP2P52943 208 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 ATP12AP54707 1039 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 CLDN18P56856 261 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 PAX2Q02962 417 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 ILKQ13418 452 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 ASAH1Q13510 395 aa3.02□□□□□ -1.93
TRAPPC13-208ENST00000505553 ITIH4Q14624 930 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms