RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 PLPP3O14495 311 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 SURF4O15260 269 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 HMGN1P05114 100 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 SUCLG1P53597 346 aaKnown RBP13.02□□□□□ -0.32
GCA-210ENST00000487445 SMN1Q16637 294 aaKnown RBP13.02□□□□□ -0.32
GCA-210ENST00000487445 C6orf141Q5SZD1 244 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 OR8J1Q8NGP2 316 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.32
GCA-210ENST00000487445 NDEL1Q9GZM8 345 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 CHST11Q9NPF2 352 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 CPAMD8Q8IZJ3 1885 aa13.02□□□□□ -0.32
GCA-210ENST00000487445 TRGV5A0A0B4J1U4 118 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 MPZL2O60487 215 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 WBP4O75554 376 aaKnown RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 PMS2P2O95744 297 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 GRK5P34947 590 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 EIF1AXP47813 144 aaKnown RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 CARD18P57730 90 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 CSNK2A1P68400 391 aaPredicted RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 SLC35A1P78382 337 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 PUDPQ08623 228 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 HBMQ6B0K9 141 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 TRILQ7L0X0 811 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 GGNQ86UU5 652 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 GHDCQ8N2G8 530 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 SCAIQ8N9R8 606 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 OR4K13Q8NH42 304 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 APH1BQ8WW43 257 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 TRUB1Q8WWH5 349 aaKnown RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
GCA-210ENST00000487445 ZDHHC11Q9H8X9 412 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 AMBNQ9NP70 447 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 NRIP3Q9NQ35 241 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 INIPQ9NRY2 104 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 BAIAP2Q9UQB8 552 aa13.02□□□□□ -0.33
GCA-210ENST00000487445 EML6Q6ZMW3 1958 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 IGHV3-15A0A0B4J1V0 119 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 FAM183AA6NL82 134 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 NPIPA5E9PKD4 350 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 MS4A18H0YCH9 400 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 XPNPEP2O43895 674 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 CXCL13O43927 109 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 LYNP07948 512 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 CD14P08571 375 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 HLA-DOBP13765 273 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 KLK2P20151 261 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 NUDT6P53370 316 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 MS4A18Q3C1V0 323 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 LAIR2Q6ISS4 152 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 ESPNLQ6ZVH7 1005 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 LRRC75AQ8NAA5 344 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 OR52E2Q8NGJ4 325 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 NEIL3Q8TAT5 605 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 RASD2Q96D21 266 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 LRR1Q96L50 414 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 Q96M85 177 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 TAAR6Q96RI8 345 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 DNAJC27Q9NZQ0 273 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 GRHPRQ9UBQ7 328 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 NPIPA1Q9UND3 350 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 B3GALT5Q9Y2C3 310 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 MYRFQ9Y2G1 1151 aa13.01□□□□□ -0.33
GCA-210ENST00000487445 TEX13CA0A0J9YWL9 993 aa13□□□□□ -0.33
GCA-210ENST00000487445 RIIAD1A6NNX1 92 aa13□□□□□ -0.33
GCA-210ENST00000487445 ZNF814B7Z6K7 855 aa13□□□□□ -0.33
GCA-210ENST00000487445 ENTPD6O75354 484 aa13□□□□□ -0.33
GCA-210ENST00000487445 TNFAIP8O95379 198 aa13□□□□□ -0.33
GCA-210ENST00000487445 TSPAN19P0C672 248 aa13□□□□□ -0.33
GCA-210ENST00000487445 HIST1H1CP16403 213 aaKnown RBP13□□□□□ -0.33
GCA-210ENST00000487445 GABRB1P18505 474 aa13□□□□□ -0.33
GCA-210ENST00000487445 LHX2P50458 406 aa13□□□□□ -0.33
GCA-210ENST00000487445 DBPQ10586 325 aaPredicted RBP13□□□□□ -0.33
GCA-210ENST00000487445 LINC00303Q3SY05 128 aa13□□□□□ -0.33
GCA-210ENST00000487445 NADK2Q4G0N4 442 aa13□□□□□ -0.33
GCA-210ENST00000487445 ARHGAP11AQ6P4F7 1023 aa13□□□□□ -0.33
GCA-210ENST00000487445 CYB561A3Q8NBI2 242 aa13□□□□□ -0.33
GCA-210ENST00000487445 SDR9C7Q8NEX9 313 aa13□□□□□ -0.33
GCA-210ENST00000487445 OR10D3Q8NH80 312 aa13□□□□□ -0.33
GCA-210ENST00000487445 OR2V1Q8NHB1 315 aa13□□□□□ -0.33
GCA-210ENST00000487445 C9orf43Q8TAL5 461 aaPredicted RBP13□□□□□ -0.33
GCA-210ENST00000487445 FBLIM1Q8WUP2 373 aa13□□□□□ -0.33
GCA-210ENST00000487445 GPX7Q96SL4 187 aaPredicted RBP13□□□□□ -0.33
GCA-210ENST00000487445 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
GCA-210ENST00000487445 CMC2Q9NRP2 79 aa13□□□□□ -0.33
GCA-210ENST00000487445 ZNF346Q9UL40 294 aaKnown RBP13□□□□□ -0.33
GCA-210ENST00000487445 LHX6Q9UPM6 363 aa13□□□□□ -0.33
GCA-210ENST00000487445 PTGES3LE9PB15 166 aa12.99□□□□□ -0.33
GCA-210ENST00000487445 WISP2O76076 250 aa12.99□□□□□ -0.33
GCA-210ENST00000487445 IFNGP01579 166 aa12.99□□□□□ -0.33
GCA-210ENST00000487445 ENPP1P22413 925 aa12.99□□□□□ -0.33
GCA-210ENST00000487445 EEF1B2P24534 225 aaKnown RBP12.99□□□□□ -0.33
GCA-210ENST00000487445 CLDN15P56746 228 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms