RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ACOT7O00154 380 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 SDC3O75056 442 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 HIST1H2ABP04908 130 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 EMDP50402 254 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 RAP2BP61225 183 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 RPS15P62841 145 aaKnown RBP11.68□□□□□ -0.54
VPS52-218ENST00000482399 LIPNQ5VXI9 398 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 OLFML2AQ68BL7 652 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 HIST3H2AQ7L7L0 130 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 STPG2Q8N412 459 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 TMEM185AQ8NFB2 350 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 ZPLD1Q8TCW7 415 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 HIST1H2ACQ93077 130 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 PGLYRP3Q96LB9 341 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 RAB11FIP5Q9BXF6 653 aa11.68□□□□□ -0.54
VPS52-218ENST00000482399 ATXN7L1Q9ULK2 861 aaPredicted RBP11.68□□□□□ -0.54
VPS52-218ENST00000482399 RPS10-NUDT3A0A1W2PQS6 291 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 EEF1E1-BLOC1S5C9J1V9 151 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 KAT7O95251 611 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 AMY2AP04746 511 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 TNFRSF17Q02223 184 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 PRAMEF17Q5VTA0 474 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 ARMC6Q6NXE6 501 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 CDRT4Q8N9R6 151 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 OR2L8Q8NGY9 312 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 TRIM43Q96BQ3 446 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 PRSS27Q9BQR3 290 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 ALG12Q9BV10 488 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 ZNF281Q9Y2X9 895 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 HRH3Q9Y5N1 445 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 A0A0G2JK05 382 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 OR2T7P0C7T2 308 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 MAP3K8P41279 467 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 FRKP42685 505 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 P2RX1P51575 399 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 TAS2R20P59543 309 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 KLF9Q13886 244 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 ARHGAP40Q5TG30 622 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 DMKNQ6E0U4 476 aaPredicted RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 RAB12Q6IQ22 244 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 KRT77Q7Z794 578 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 ZNF227Q86WZ6 799 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 PLPP7Q8NBV4 271 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 TMIEQ8NEW7 156 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 OR2T27Q8NH04 317 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 AHCYL2Q96HN2 611 aaKnown RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 TSNAXQ99598 290 aaKnown RBP11.67□□□□□ -0.54
VPS52-218ENST00000482399 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
VPS52-218ENST00000482399 C5orf51A6NDU8 294 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR2AT4A6NND4 320 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 GABARAPH6UMI1 98 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 EIF1AYO14602 144 aaKnown RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 MOSPD3O75425 235 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 EIF1AXP47813 144 aaKnown RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 TPMTP51580 245 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 ERVK-21P61565 698 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 ADAM8P78325 824 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 DPTQ07507 201 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 FIGLAQ6QHK4 219 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 LRRC69Q6ZNQ3 347 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR6V1Q8N148 313 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR4D10Q8NGI6 311 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 RSPRY1Q96DX4 576 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 UBL7Q96S82 380 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 ZNF649Q9BS31 505 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SLC17A9Q9BYT1 436 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 TRIM2Q9C040 744 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 KANTRA0A1W2PQU2 76 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 POM121BA6NF01 834 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 P2RX6O15547 441 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 PRAF2O60831 178 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SC5DO75845 299 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 EML2O95834 649 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 CBX7O95931 251 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 TACSTD2P09758 323 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 HTRA3P83110 453 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 BDH1Q02338 343 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 C1orf61Q13536 156 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 HLXQ14774 488 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 B3GNTL1Q67FW5 361 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 UNQ6126/PRO20091Q6UXV3 157 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SAMD14Q8IZD0 417 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 MRPL43Q8N983 215 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms