RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 HIST3H2AQ7L7L0 130 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 MAMDC2Q7Z304 686 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 ADGRE4PQ86SQ3 457 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 CCDC71Q8IV32 467 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 WDFY1Q8IWB7 410 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 LNX2Q8N448 690 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 DHRSXQ8N5I4 330 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 C10orf53Q8N6V4 93 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 CLDN22Q8N7P3 220 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR13C2Q8NGS9 318 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR4Q3Q8NH05 313 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR5J2Q8NH18 312 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR10D3Q8NH80 312 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR2V1Q8NHB1 315 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 RHOXF1Q8NHV9 184 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZPLD1Q8TCW7 415 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 DNAJC9Q8WXX5 260 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ROBO4Q8WZ75 1007 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HIST1H2ACQ93077 130 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF845Q96IR2 970 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 TXNDC15Q96J42 360 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 GPR137Q96N19 417 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 RDH12Q96NR8 316 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 MUS81Q96NY9 551 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OXGR1Q96P68 337 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 GABARAPL3Q9BY60 117 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SRXN1Q9BYN0 137 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 PLA2G12AQ9BZM1 189 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 PRDM14Q9GZV8 571 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 TSPAN10Q9H1Z9 355 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 LDAHQ9H6V9 325 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 FKRPQ9H9S5 495 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF556Q9HAH1 456 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 NRIP3Q9NQ35 241 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 NANSQ9NR45 359 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF226Q9NYT6 803 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 B3GAT1Q9P2W7 334 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 IL20RAQ9UHF4 553 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF346Q9UL40 294 aaKnown RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 B3GALT5Q9Y2C3 310 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 POFUT2Q9Y2G5 429 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HIF3AQ9Y2N7 669 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF835Q9Y2P0 537 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SPIN1Q9Y657 262 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 ATMQ13315 3056 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 CNTRLQ7Z7A1 2325 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HEATR5AQ86XA9 2040 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 EML6Q6ZMW3 1958 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TRAV27A0A087WT01 109 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 OR14I1A6ND48 311 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 AQP7P3A6NL99 342 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 GJE1A6NN92 205 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ZNF716A6NP11 495 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 KDM4EB2RXH2 506 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 NPIPA2E9PIF3 369 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 NPIPA3F8WFD2 350 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 M0R082 166 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ACOT7O00154 380 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 EIF1AYO14602 144 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 ARPC3O15145 178 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SMAD9O15198 467 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 IDH3BO43837 385 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 EIF1BO60739 113 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 NDUFB2O95178 105 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TXNDC12O95881 172 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TGM6O95932 706 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 F13BP05160 661 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 GNAO1P09471 354 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SAGP10523 405 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 GABRB1P18505 474 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 POU3F2P20265 443 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 IGFBP5P24593 272 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PTGS2P35354 604 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 CDKN2AP42771 156 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 RAD23AP54725 363 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PRPS1P60891 318 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 IL1RL1Q01638 556 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SRYQ05066 204 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 RPL18Q07020 188 aaKnown RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 SLC17A1Q14916 467 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SGCBQ16585 318 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PRR30Q53SZ7 412 aaPredicted RBP5.31□□□□□ -1.56
USP39-213ENST00000467885 C6orf52Q5T4I8 152 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SLX4IPQ5VYV7 408 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 TTC23Q5W5X9 447 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 C12orf73Q69YU5 71 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 RTL6Q6ICC9 239 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 LAIR2Q6ISS4 152 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ARHGAP11AQ6P4F7 1023 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PAQR6Q6TCH4 344 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PLXDC2Q6UX71 529 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 IZUMO2Q6UXV1 221 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 DPY19L2P2Q6ZN68 376 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 ZNF620Q6ZNG0 422 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 CREB3L2Q70SY1 520 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 FAM122BQ7Z309 247 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 PXKQ7Z7A4 578 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 UBQLNLQ8IYU4 475 aa5.31□□□□□ -1.56
USP39-213ENST00000467885 SCAIQ8N9R8 606 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms