RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CTAGE8P0CG41 777 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 MYBL1P10243 752 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CPN2P22792 545 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 GJC1P36383 396 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 GRIA1P42261 906 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 SSR1P43307 286 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PGGT1BP53609 377 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 DYNLT1P63172 113 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF763Q0D2J5 394 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CSTF3Q12996 717 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CUL1Q13616 776 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 DHX34Q14147 1143 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 EFR3AQ14156 821 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PLPPR5Q32ZL2 321 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 HIKESHIQ53FT3 197 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PCID2Q5JVF3 399 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 OTUD3Q5T2D3 398 aaPredicted RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 DUPD1Q68J44 220 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 LRRN1Q6UXK5 716 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 APOOLQ6UXV4 268 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 TMIGD1Q6UXZ0 262 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 BZW1Q7L1Q6 419 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF771Q7L3S4 317 aaPredicted RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CTAGE4Q8IX94 777 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 KIF18AQ8NI77 898 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 ST7LQ8TDW4 575 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 RAB1CQ92928 201 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 REXO5Q96IC2 774 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 TSNARE1Q96NA8 513 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 ALS2CR12Q96Q35 445 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PRR25Q96S07 402 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 GAL3ST1Q99999 423 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 THAP7Q9BT49 309 aaPredicted RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PTGES2Q9H7Z7 377 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 NT5DC2Q9H857 520 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PARVBQ9HBI1 364 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 PPANQ9NQ55 473 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 TIGARQ9NQ88 270 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 MGAT4CQ9UBM8 478 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 IL20RAQ9UHF4 553 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 TRMT6Q9UJA5 497 aaKnown RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 VPREB3Q9UKI3 123 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 NFU1Q9UMS0 254 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 ABCG2Q9UNQ0 655 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 CMAHPQ9Y471 501 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 NUP214P35658 2090 aaPredicted RBP4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
SBDSP1-204ENST00000453858 A0A087WZY1 265 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV2OR16-5A0A0B4J2B6 119 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV1-69-2A0A0G2JMI3 117 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 A0A0U1RQK1 487 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 OR6C65A6NJZ3 312 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 GLOD5A6NK44 160 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 CLDN25C9JDP6 229 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 H0YIZ8 118 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 H3BMM5 538 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PGRMC2O15173 223 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 SCO2O43819 266 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 GMFGO60234 142 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 NDUFS3O75489 264 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PROSCO94903 275 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 WDR47O94967 919 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ADRA1DP25100 572 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 CCL8P80075 99 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 BLMHQ13867 455 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 HFEQ30201 348 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PDSS1Q5T2R2 415 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF571Q7Z3V5 609 aaPredicted RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 GPR180Q86V85 440 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 UBE2J2Q8N2K1 259 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 TTLQ8NG68 377 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 DPF1Q92782 380 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 C16orf58Q96GQ5 468 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 RNF145Q96MT1 663 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 MAK16Q9BXY0 300 aaKnown RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 GPR61Q9BZJ8 451 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 PATZ1Q9HBE1 687 aaKnown RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 OBP2BQ9NPH6 170 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ACOXLQ9NUZ1 547 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 NKIRAS2Q9NYR9 191 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 UBAP1Q9NZ09 502 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ZMAT5Q9UDW3 170 aaKnown RBP4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 VDAC3Q9Y277 283 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 DHRS7Q9Y394 339 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 ASB4Q9Y574 426 aa4.25□□□□□ -1.73
SBDSP1-204ENST00000453858 KIAA2026Q5HYC2 2103 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV2-70DA0A0C4DH43 119 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 A0A1W2PRB8 838 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF716A6NP11 495 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 C17orf100A8MU93 164 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 HACD1B0YJ81 288 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 NME6O75414 186 aaPredicted RBP4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV2-70P01814 119 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms