RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TUBA1AQ71U36 451 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 DHDDSQ86SQ9 333 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 COMTD1Q86VU5 262 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 C17orf78Q8N4C9 275 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 LSMEM1Q8N8F7 131 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 HIPK4Q8NE63 616 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 C1orf162Q8NEQ5 155 aaPredicted RBP8.13□□□□□ -1.11
NUP50-206ENST00000422489 OR1K1Q8NGR3 316 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 DNAJA4Q8WW22 397 aaPredicted RBP8.13□□□□□ -1.11
NUP50-206ENST00000422489 SLC38A4Q969I6 547 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 OXGR1Q96P68 337 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 KCNS3Q9BQ31 491 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 RSPO3Q9BXY4 272 aaPredicted RBP8.13□□□□□ -1.11
NUP50-206ENST00000422489 TMEM38AQ9H6F2 299 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 VIPAS39Q9H9C1 493 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 CBLN4Q9NTU7 201 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 MOKQ9UQ07 419 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 ANGPT4Q9Y264 503 aa8.13□□□□□ -1.11
NUP50-206ENST00000422489 MTORP42345 2549 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 NUP214P35658 2090 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 TRAV36DV7A0A075B6V5 113 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 TRBV5-3A0A0A0MS03 114 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 OR6C65A6NJZ3 312 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 FTCDNL1E5RQL4 147 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ATP6V1G2-DDX39BF2Z307 99 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 M0R082 166 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 AIM2O14862 343 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 EDF1O60869 148 aaKnown RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 SLC43A1O75387 559 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 OPN1SWP03999 348 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 BMP4P12644 408 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 APOBEC3AP31941 199 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 MTPNP58546 118 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ARF1P84077 181 aaKnown RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 SELPLGQ14242 412 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ADRM1Q16186 407 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 CARD17Q5XLA6 110 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 H1FNTQ75WM6 255 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 LINGO2Q7L985 606 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 NET1Q7Z628 596 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 DTX2Q86UW9 622 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 RANBP3LQ86VV4 465 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 GPR137CQ8N3F9 429 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 C11orf65Q8NCR3 313 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 BHLHE22Q8NFJ8 381 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 SLC26A7Q8TE54 656 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 BCL2L2Q92843 193 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 FBXO17Q96EF6 278 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ALKBH3Q96Q83 286 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 CGREF1Q99674 301 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 MCHR1Q99705 422 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 WFDC6Q9BQY6 131 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 CPPED1Q9BRF8 314 aaPredicted RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 PTDSS2Q9BVG9 487 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 ASPNQ9BXN1 380 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 AMBRA1Q9C0C7 1298 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 C12orf10Q9HB07 376 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 YAE1D1Q9NRH1 226 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 TESQ9UGI8 421 aaKnown RBP8.12□□□□□ -1.11
NUP50-206ENST00000422489 PMF1-BGLAPU3KQ54 211 aa8.12□□□□□ -1.11
NUP50-206ENST00000422489 IGKV1D-42A0A075B6H8 117 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 IGHV1-18A0A0C4DH31 117 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CPSF4LA6NMK7 179 aaKnown RBP8.11□□□□□ -1.11
NUP50-206ENST00000422489 ZNF726A6NNF4 738 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 MS4A18H0YCH9 400 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 M0R3G1 203 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 M0R3H8 397 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 TPST2O60704 377 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 SERPINI2O75830 405 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 MFN2O95140 757 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CRYAAP02489 173 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 AHCYP23526 432 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CAPZA2P47755 286 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CDH12P55289 794 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 DMTNQ08495 405 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 RBBP4Q09028 425 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 PMS2P3Q13401 168 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 NRF1Q16656 503 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 DUSP7Q16829 419 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CEACAM16Q2WEN9 425 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 MS4A18Q3C1V0 323 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 FAM69AQ5T7M9 428 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 FAM91A1Q658Y4 838 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 ZNF544Q6NX49 715 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 CLEC2AQ6UVW9 174 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 C6orf89Q6UWU4 347 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 RETREG3Q86VR2 466 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 UEVLDQ8IX04 471 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 PIK3C3Q8NEB9 887 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 OR10A6Q8NH74 314 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 VANGL1Q8TAA9 524 aaPredicted RBP8.11□□□□□ -1.11
NUP50-206ENST00000422489 TXNDC15Q96J42 360 aa8.11□□□□□ -1.11
NUP50-206ENST00000422489 SLC38A2Q96QD8 506 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms