RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TANKQ92844 425 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 TAAR8Q969N4 342 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ALG12Q9BV10 488 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 OPA3Q9H6K4 179 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 EMC9Q9Y3B6 208 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CHST2Q9Y4C5 530 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 AP1G1O43747 822 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SLC2A10O95528 541 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 NR0B2Q15466 257 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 RNF141Q8WVD5 230 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SECTM1Q8WVN6 248 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 NTNG1Q9Y2I2 539 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ACTL6BO94805 426 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 TLE1Q04724 770 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 RUNX3Q13761 415 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SLC14A2Q15849 920 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 KCTD11Q693B1 232 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 FAM111BQ6SJ93 734 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 ISL2Q96A47 359 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 PSD2Q9BQI7 771 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 PTDSS2Q9BVG9 487 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 OR11A1Q9GZK7 315 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ANKRD61A6NGH8 418 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ZFP92A6NM28 416 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CPMP14384 443 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CSNK1A1P48729 337 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 FOXK2Q01167 660 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ARHGAP19Q14CB8 494 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CLDN22Q8N7P3 220 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 RELL2Q8NC24 303 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 SCARB1Q8WTV0 552 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SLC7A6Q92536 515 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 RAB3CQ96E17 227 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ZNF816-ZNF321PA0A0X1KG74 233 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SULT1C4O75897 302 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CBX7O95931 251 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 SRMP19623 302 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 HIST1H1TP22492 207 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 SLC6A11P48066 632 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CNN3Q15417 329 aaKnown RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 ADIRFQ15847 76 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 PHLDA2Q53GA4 152 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 Q6ZSR6 202 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 ZNF321PQ8N8H1 164 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
UBR4-205ENST00000417040 CGGBP1Q9UFW8 167 aaPredicted RBP11.18□□□□□ -0.62
UBR4-205ENST00000417040 SUSD5O60279 629 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 TMEM11P17152 192 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CPT2P23786 658 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 RAB31Q13636 194 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CRMP1Q14194 572 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CLVS2Q5SYC1 327 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 LAMB4A4D0S4 1761 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 SLC6A8P48029 635 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 FOXK1P85037 733 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CAMK2DQ13557 499 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ZNF74Q16587 644 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 AADACL3Q5VUY0 350 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ADAM5Q6NVV9 412 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 RHOUQ7L0Q8 258 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 DPPA4Q7L190 304 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 GDF7Q7Z4P5 450 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OR51D1Q8NGF3 324 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 YIPF5Q969M3 257 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 PDCD1LG2Q9BQ51 273 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 A0A0J9YY10 115 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 EIF3FO00303 357 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 CNMDO75829 334 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 FURINP09958 794 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 JUNBP17275 347 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 CEBPBP17676 345 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 OR10A3P58181 314 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 KCNJ10P78508 379 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 DGCR2P98153 550 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 PDZK1IP1Q13113 114 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 TRIM61Q5EBN2 209 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 TMEM182Q6ZP80 229 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 CBARPQ8N350 705 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 LILRA3Q8N6C8 439 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
UBR4-205ENST00000417040 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
UBR4-205ENST00000417040 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms