RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NFYBP25208 207 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 AVPR2P30518 371 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 CSF2RBP32927 897 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 CAPZA1P52907 286 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 FOXK2Q01167 660 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 LTBQ06643 244 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 CAMK2DQ13557 499 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 ZNHIT3Q15649 155 aaPredicted RBP8.14□□□□□ -1.11
RTN4-206ENST00000394611 PUS10Q3MIT2 529 aaKnown RBP8.14□□□□□ -1.11
RTN4-206ENST00000394611 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 THSD4Q6ZMP0 1018 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 LRRC69Q6ZNQ3 347 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 FAM83HQ6ZRV2 1179 aaPredicted RBP8.14□□□□□ -1.11
RTN4-206ENST00000394611 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 FRMD1Q8N878 549 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 IL17RCQ8NAC3 791 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 NR4A3Q92570 626 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 PEX11GQ96HA9 241 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 CNN2Q99439 309 aaKnown RBP8.14□□□□□ -1.11
RTN4-206ENST00000394611 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 MYNNQ9NPC7 610 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 FBXO34Q9NWN3 711 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 V9GY05 133 aa8.14□□□□□ -1.11
RTN4-206ENST00000394611 D6RAR5 112 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 H7C0S8 307 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 F11P03951 625 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 SLC35G6P0C7Q6 338 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 MPC1LP0DKB6 136 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CTSAP10619 480 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 GRK6P43250 576 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 C19orf57Q0VDD7 668 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 BAMBIQ13145 260 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CBFBQ13951 182 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 HLXQ14774 488 aaPredicted RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 EBPQ15125 230 aaKnown RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 ETFDHQ16134 617 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TRMT12Q53H54 448 aaKnown RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 C3orf33Q6P1S2 294 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 PARS2Q7L3T8 475 aaKnown RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 ZNF227Q86WZ6 799 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 BATF2Q8N1L9 274 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 PLA2G15Q8NCC3 412 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR5T1Q8NG75 326 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR5D18Q8NGL1 313 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR13C9Q8NGT0 318 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TCEAL3Q969E4 200 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 SLAMF9Q96A28 289 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 RBM18Q96H35 190 aaKnown RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 AMDHD1Q96NU7 426 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 IL21RQ9HBE5 538 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 ZSCAN32Q9NX65 697 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 KCNE1BA0A087WTH5 132 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TMEM129A0AVI4 362 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 SYT5O00445 386 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 RAB3AP20336 220 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 HTR2AP28223 471 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TNK1Q13470 666 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TCEAL5Q5H9L2 206 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 DCAF12L2Q5VW00 463 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CLEC9AQ6UXN8 241 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 MSANTD1Q6ZTZ1 278 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 DCUN1D3Q8IWE4 304 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 SLC35F2Q8IXU6 374 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR4D10Q8NGI6 311 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR2A12Q8NGT7 310 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 YIPF5Q969M3 257 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CHST6Q9GZX3 395 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 NXF2Q9GZY0 626 aaKnown RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 CKLFQ9UBR5 152 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 MYLKQ15746 1914 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 POLEQ07864 2286 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 A0A087WV48 116 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CENPVL1A0A0U1RR11 272 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR6C65A6NJZ3 312 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TFPIP10646 304 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 PPP3CBP16298 524 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CTRB1P17538 263 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 PRSS3P35030 304 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OPRD1P41143 372 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 POU4F2Q12837 409 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 MFSD13AQ14CX5 517 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TMEM255AQ5JRV8 349 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 PDSS1Q5T2R2 415 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TIGD3Q6B0B8 471 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CTRB2Q6GPI1 263 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 GRASPQ7Z6J2 395 aaPredicted RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 NR2C2APQ86WQ0 139 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 CLRN3Q8NCR9 226 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 OR8D1Q8WZ84 308 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 FATE1Q969F0 183 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 RERGQ96A58 199 aaPredicted RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 ELP4Q96EB1 424 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 TINAGL1Q9GZM7 467 aaPredicted RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 SEC61A2Q9H9S3 476 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 BRF2Q9HAW0 419 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 MKKSQ9NPJ1 570 aaPredicted RBP8.13□□□□□ -1.11
RTN4-206ENST00000394611 LANCL2Q9NS86 450 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 ASB6Q9NWX5 421 aa8.13□□□□□ -1.11
RTN4-206ENST00000394611 ELF5Q9UKW6 265 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms