RNA–Protein interactions for RNA: ENST00000365560.1

RNA5SP88-201, Transcript of RNA, 5S ribosomal pseudogene 88, humanhuman

BASIC

Gene RNA5SP88, Length 109 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP88-201ENST00000365560 IFNB1P01574 187 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 H2BFMP0C1H6 154 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 PRKXP51817 358 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 HNRNPA3P51991 378 aaKnown RBP2.55□□□□□ -2
RNA5SP88-201ENST00000365560 AP3M2P53677 418 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 NUP107P57740 925 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 PJVKQ0ZLH3 352 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 LRRC26Q2I0M4 334 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 ZNF658BQ4V348 819 aaPredicted RBP2.55□□□□□ -2
RNA5SP88-201ENST00000365560 FAM71F2Q6NXP2 309 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 MAST2Q6P0Q8 1798 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 CCDC137Q6PK04 289 aaKnown RBP2.55□□□□□ -2
RNA5SP88-201ENST00000365560 SYT10Q6XYQ8 523 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 ZSCAN30Q86W11 494 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 TPRA1Q86W33 373 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 OR10A7Q8NGE5 316 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 OR5L2Q8NGL0 311 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 OR10T2Q8NGX3 314 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 FBXO30Q8TB52 745 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 DNAJA4Q8WW22 397 aaPredicted RBP2.55□□□□□ -2
RNA5SP88-201ENST00000365560 TCTEX1D2Q8WW35 142 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 RPL3LQ92901 407 aaKnown RBP2.55□□□□□ -2
RNA5SP88-201ENST00000365560 PGLYRP4Q96LB8 373 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 KLHDC3Q9BQ90 382 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 HPF1Q9NWY4 346 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 PRO0461Q9UI25 63 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 BTNL2Q9UIR0 455 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 ERVW-1Q9UQF0 538 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 KIF3AQ9Y496 699 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 UGT2A1Q9Y4X1 527 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 MAD1L1Q9Y6D9 718 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 DMDP11532 3685 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 REV3LO60673 3130 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 CHD9Q3L8U1 2897 aa2.55□□□□□ -2
RNA5SP88-201ENST00000365560 SIPA1L1O43166 1804 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 LTBP2Q14767 1821 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 FRMPD3Q5JV73 1810 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ATAD5Q96QE3 1844 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 A0A0G2JRQ6 117 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 A0A1B0GWJ7 208 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 PSMB11A5LHX3 300 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 NPIPA7E9PJI5 369 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 G3V4G9 280 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 K7EPI3 171 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 TM7SF2O76062 418 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 NPIPA8P0DM63 369 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ZNF17P17021 662 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 HTR1EP28566 365 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ADORA1P30542 326 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 HPCAL1P37235 193 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 CSNK1G2P78368 415 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 IRX3P78415 501 aaPredicted RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 CNTN2Q02246 1040 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 MECOMQ03112 1051 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 MXD4Q14582 209 aaPredicted RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 GGTA1PQ4G0N0 100 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 HSP90AA5PQ58FG0 334 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 RIPPLY2Q5TAB7 128 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ATL3Q6DD88 541 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 BLOC1S2Q6QNY1 142 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ACOT7LQ6ZUV0 252 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ACOT1Q86TX2 421 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 CLDN19Q8N6F1 224 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 C20orf203Q8NBC4 194 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 ZNF740Q8NDX6 193 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 OR56B4Q8NH76 319 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 FAM3CQ92520 227 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 OSTF1Q92882 214 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 CDX2Q99626 313 aaPredicted RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 SDHCQ99643 169 aaPredicted RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 TMEM117Q9H0C3 514 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 NXF5Q9H1B4 397 aaKnown RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 PORCNQ9H237 461 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 RHBGQ9H310 441 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 SMYD3Q9H7B4 428 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 LIN28AQ9H9Z2 209 aaKnown RBP2.54□□□□□ -2
RNA5SP88-201ENST00000365560 NPIPA1Q9UND3 350 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 SLCO1B1Q9Y6L6 691 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 RLFQ13129 1914 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 BDP1A6H8Y1 2624 aa2.54□□□□□ -2
RNA5SP88-201ENST00000365560 MYO15AQ9UKN7 3530 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 RS1O15537 224 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 SMPD2O60906 423 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 CNMDO75829 334 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 HOXC4P09017 264 aaPredicted RBP2.53□□□□□ -2
RNA5SP88-201ENST00000365560 UBTFL1P0CB47 393 aaPredicted RBP2.53□□□□□ -2
RNA5SP88-201ENST00000365560 CYBAP13498 195 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 CTRLP40313 264 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 HLCSP50747 726 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 CCNA1P78396 465 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 SHHQ15465 462 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 MPPED2Q15777 294 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 TATDN3Q17R31 274 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 USH1GQ495M9 461 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 MFSD14CQ5VZR4 134 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 DHRSXQ8N5I4 330 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 TRPV1Q8NER1 839 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 NEIL3Q8TAT5 605 aa2.53□□□□□ -2
RNA5SP88-201ENST00000365560 MRPS31Q92665 395 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms