RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 MGAT4AQ9UM21 535 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC9A8Q9Y2E8 581 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 MFHAS1Q9Y4C4 1052 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 AUP1Q9Y679 476 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 FBN2P35556 2912 aa4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 SPTBN1Q01082 2364 aaKnown RBP4.53□□□□□ -1.68
RNU4-39P-201ENST00000362455 A0A0U1RQV5 110 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 CXorf51AA0A1B0GTR3 108 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ANKRD30BLA7E2S9 258 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 RNF212BA8MTL3 300 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 H3BMH7 237 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 KDELR3O43731 214 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 NUDT21O43809 227 aaKnown RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 VPS26AO75436 327 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 NDUFA7O95182 113 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 PCCBP05166 539 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ALPIP09923 528 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 CTSEP14091 401 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 AK4P27144 223 aaPredicted RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 CD82P27701 267 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 MDH1P40925 334 aaKnown RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 RIDAP52758 137 aaKnown RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 MRGPRG-AS1Q2M3A8 158 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 PARP6Q2NL67 630 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ADPRMQ3LIE5 342 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 CEP85LQ5SZL2 805 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 AFTPHQ6ULP2 937 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 LRRC31Q6UY01 552 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF497Q6ZNH5 498 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 GKN2Q86XP6 184 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 FAM71AQ8IYT1 594 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ARFGAP2Q8N6H7 521 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 JOSD2Q8TAC2 188 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 NELFBQ8WX92 580 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ART4Q93070 314 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF597Q96LX8 424 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 TRIM51Q9BSJ1 452 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 CCDC28BQ9BUN5 200 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 COQ10BQ9H8M1 238 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 IL1RL2Q9HB29 575 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 APMAPQ9HDC9 416 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 RMND1Q9NWS8 449 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 SEC14L4Q9UDX3 406 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR12D3Q9UGF7 316 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 BLOC1S6Q9UL45 172 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 EMCNQ9ULC0 261 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 FZR1Q9UM11 496 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 PCYT1BQ9Y5K3 369 aaPredicted RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 MRPS18BQ9Y676 258 aaKnown RBP4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 FKBP7Q9Y680 259 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 RP1P56715 2156 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 NF1P21359 2839 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 DOCK9Q9BZ29 2069 aa4.52□□□□□ -1.69
RNU4-39P-201ENST00000362455 PRRC2CQ9Y520 2896 aaKnown RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 DOPEY1Q5JWR5 2465 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 KIF26BQ2KJY2 2108 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 POLQO75417 2590 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 IGHV3OR16-10A0A075B7F0 116 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 IGHV1OR21-1A0A087WYE8 117 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 A0A087WZY1 265 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 A0A0U1RQS6 177 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TMEM110-MUSTN1A8MSY1 372 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 A8MX80 341 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 GOLGA8SH3BPF8 625 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SGK494L7N484 410 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 RAD1O60671 282 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ECDO95905 644 aaPredicted RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TNFP01375 233 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 PLEKP08567 350 aaPredicted RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 KRT7P08729 469 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 HOXC4P09017 264 aaPredicted RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 THRAP10827 490 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 UCP1P25874 307 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TRPC1P48995 793 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 HSD17B7P56937 341 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 HERVK_113P63132 956 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ERVK-8P63133 956 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SRYQ05066 204 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 DEFB109BQ30KR1 87 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TAF3Q5VWG9 929 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 RWDD4Q6NW29 188 aaKnown RBP4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 RFLNAQ6ZTI6 216 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ARCQ7LC44 396 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ERASQ7Z444 233 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TMEM135Q86UB9 458 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR6C4Q8NGE1 309 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR56A4Q8NGH8 313 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 RXFP2Q8WXD0 754 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 TMEM159Q96B96 161 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC25A36Q96CQ1 311 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 SMIM14Q96QK8 99 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 CTRCQ99895 268 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 ATF6BQ99941 703 aa4.51□□□□□ -1.69
RNU4-39P-201ENST00000362455 CHCHD5Q9BSY4 110 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms