RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 KCNJ15Q99712 375 aa12.23□□□□□ -0.45
TNFRSF21-201ENST00000296861 RXFP3Q9NSD7 469 aa12.23□□□□□ -0.45
TNFRSF21-201ENST00000296861 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
TNFRSF21-201ENST00000296861 DAPP1Q9UN19 280 aa12.23□□□□□ -0.45
TNFRSF21-201ENST00000296861 ERVK-19Q9WJR5 959 aa12.23□□□□□ -0.45
TNFRSF21-201ENST00000296861 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 C13orf42A0A1B0GVH6 325 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 RP2O75695 350 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 OPN1LWP04000 364 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SPARCP09486 303 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 RPS15P62841 145 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CAMK2DQ13557 499 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ARHGAP11AQ6P4F7 1023 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 TMEM65Q6PI78 240 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 KIRREL2Q6UWL6 708 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CAMKVQ8NCB2 501 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 TOR1AIP2Q8NFQ8 470 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SPPL3Q8TCT6 385 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 BRIX1Q8TDN6 353 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 PPP1R14AQ96A00 147 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 GAL3ST3Q96A11 431 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ZNF471Q9BX82 626 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 RAB11FIP5Q9BXF6 653 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 PPA2Q9H2U2 334 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 BHLHE40O14503 412 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SEC14L5O43304 696 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 LILRB3O75022 631 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ZFPL1O95159 310 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 IGHA1P01876 353 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CTSBP07858 339 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 TRA2BP62995 288 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 GPR18Q14330 331 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 AGBL4Q5VU57 503 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 PAQR7Q86WK9 346 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 LNX2Q8N448 690 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CDRT4Q8N9R6 151 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 LINC00862A6NCI5 91 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ACSM4P0C7M7 580 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 HOXB2P14652 356 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 GNALP38405 381 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ILF3Q12906 894 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CDK5R1Q15078 307 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 MRM1Q6IN84 353 aaKnown RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ADAMTSL4Q6UY14 1074 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SLC51BQ86UW2 128 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 BMPERQ8N8U9 685 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 OR51Q1Q8NH59 317 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 OR5AK2Q8NH90 309 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SCMH1Q96GD3 660 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 GPR137Q96N19 417 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 CMKLR1Q99788 373 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 PRSS27Q9BQR3 290 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 NRIP3Q9NQ35 241 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 MED17Q9NVC6 651 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 SDHAF2Q9NX18 166 aa12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 AKAP7Q9P0M2 348 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF21-201ENST00000296861 ANAPC1Q9H1A4 1944 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 PRSS38A1L453 326 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 PYCARD-AS1I3L0S3 204 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 NFYAP23511 347 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 BTCP35070 178 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 IGFALSP35858 605 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 RPS21P63220 83 aaKnown RBP12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ACTC1P68032 377 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ACTA1P68133 377 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 FAM53BQ14153 422 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 OR51S1Q8NGJ8 323 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 OR4C3Q8NH37 302 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ST8SIA4Q92187 359 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ZNF681Q96N22 645 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 RBP7Q96R05 134 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ISYNA1Q9NPH2 558 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 SLCO1C1Q9NYB5 712 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 ACTR10Q9NZ32 417 aa12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 EXOGQ9Y2C4 368 aaKnown RBP12.21□□□□□ -0.45
TNFRSF21-201ENST00000296861 CARNS1A5YM72 827 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 OR6C68A6NDL8 312 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 AGR2O95994 175 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 HLA-DQB1P01920 261 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 PSMD4P55036 377 aaKnown RBP12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 GMFBP60983 142 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 RNLSQ5VYX0 342 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 IL17RCQ8NAC3 791 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 MFSD9Q8NBP5 474 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 MMABQ96EY8 250 aaPredicted RBP12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 SYT4Q9H2B2 425 aa12.21□□□□□ -0.46
TNFRSF21-201ENST00000296861 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms