RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 NOXA1Q86UR1 476 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 C17orf82Q86X59 251 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 IZUMO1Q8IYV9 350 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 TEX19Q8NA77 164 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 FAM174AQ8TBP5 190 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 MSANTD3Q96H12 275 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 LCORQ96JN0 433 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 RNF170Q96K19 258 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 LPAR4Q99677 370 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 SLC19A3Q9BZV2 496 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 NOX4Q9NPH5 578 aa16.72■□□□□ 0.27
SHKBP1-201ENST00000291842 TRAV1-2A0A0B4J238 106 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 NOTOA8MTQ0 251 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 INMT-MINDY4F8WBC2 141 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 GLCEO94923 617 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 DDAH2O95865 285 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 AHCYP23526 432 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 RPS27P42677 84 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 CFHR1Q03591 330 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 OTPQ5XKR4 325 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 FAM122BQ7Z309 247 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 OR1L3Q8NH93 324 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 SLC46A1Q96NT5 459 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 DERL3Q96Q80 235 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 PELOQ9BRX2 385 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 NUDT9Q9BW91 350 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 HIF3AQ9Y2N7 669 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 KLHDC2Q9Y2U9 406 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 NPFFR2Q9Y5X5 522 aa16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-201ENST00000291842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 TMEM72A0PK05 275 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 TVP23AA6NH52 213 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 H3BMH7 237 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 HCRTR2O43614 444 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ARL6IP5O75915 188 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 CD14P08571 375 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 UCHL1P09936 223 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ARSBP15848 533 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ITPKBP27987 946 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 CAPZA2P47755 286 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 HNRNPKP61978 463 aaKnown RBP eCLIP16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 C1QL3Q5VWW1 255 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 MARCH3Q86UD3 253 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF721Q8TF20 911 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 TAAR8Q969N4 342 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ADIPOR1Q96A54 375 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 TMEM246Q9BRR3 403 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 PHF7Q9BWX1 381 aaPredicted RBP16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 RXFP3Q9NSD7 469 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 ITGB1BP2Q9UKP3 347 aa16.71■□□□□ 0.26
SHKBP1-201ENST00000291842 WDR87Q6ZQQ6 2873 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 SMLR1H3BR10 107 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 PIN1P1O15428 100 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ORC5O43913 435 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 GPANK1O95872 356 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 OR8G3PP0DMU2 310 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC6A1P30531 599 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 NR0B1P51843 470 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 DGCR2P98153 550 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF117Q03924 483 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 RPL18Q07020 188 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 HSD17B12Q53GQ0 312 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC35D3Q5M8T2 416 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 PRSS45Q7RTY3 260 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 BMPERQ8N8U9 685 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 LRRC75AQ8NAA5 344 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF671Q8TAW3 534 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 GPX7Q96SL4 187 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 TSPAN10Q9H1Z9 355 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 TTYH1Q9H313 450 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 MCUBQ9NWR8 336 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 CABIN1Q9Y6J0 2220 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 TRAV6A0A075B6T7 132 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ANKRD61A6NGH8 418 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 H3BSH0 61 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ZFPL1O95159 310 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 NUDT14O95848 222 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 IGKV3-11P04433 115 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ASAH2BP0C7U1 165 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 FOLR1P15328 257 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 GALNSP34059 522 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ADH7P40394 386 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 CDK10Q15131 360 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 NSDHLQ15738 373 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 HES5Q5TA89 166 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 PYHIN1Q6K0P9 492 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 SHISA6Q6ZSJ9 500 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 ZNF433Q8N7K0 673 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 CEP76Q8TAP6 659 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 GRHPRQ9UBQ7 328 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 EPHA6Q9UF33 1036 aa16.7■□□□□ 0.26
SHKBP1-201ENST00000291842 RGS13O14921 159 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC43A1O75387 559 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 ADRB1P08588 477 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SRMP19623 302 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SDHAP31040 664 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 NXPH1P58417 271 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 HSD11B2P80365 405 aa16.69■□□□□ 0.26
SHKBP1-201ENST00000291842 SLC36A2Q495M3 483 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms