RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MANFP55145 182 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 SELPLGQ14242 412 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CD226Q15762 336 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CYP51A1Q16850 503 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 TIMM23BQ5SRD1 257 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CCNJQ5T5M9 372 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CYB5R2Q6BCY4 276 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 KRT80Q6KB66 452 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 SLC2A7Q6PXP3 512 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 IKBIPQ70UQ0 350 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 SSX8Q7RTT4 187 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 PATL1Q86TB9 770 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 MUC15Q8N387 334 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 COX18Q8N8Q8 333 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 SLC16A11Q8NCK7 471 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 NUP43Q8NFH3 380 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.91□□□□□ -1.33e-7■■■□□ 17.3
CLK1-215ENST00000621181 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 ZFP90Q8TF47 636 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CIDECQ96AQ7 238 aaPredicted RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 OTUB1Q96FW1 271 aaPredicted RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 CCDC115Q96NT0 180 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 MS4A4EQ96PG1 132 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 KCTD14Q9BQ13 255 aaPredicted RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 KLHDC3Q9BQ90 382 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 YTHDF1Q9BYJ9 559 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 CHODLQ9H9P2 273 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CBLN4Q9NTU7 201 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 WBP11Q9Y2W2 641 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 HEATR1Q9H583 2144 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 TRBV5-3A0A0A0MS03 114 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 A0A1W2PQD3 144 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ELOA3DA6NLF2 546 aaPredicted RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 H0YAE9 185 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 EI24O14681 340 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 LMX1BO60663 402 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 CRCPO75575 148 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 IFI6P09912 130 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 G6PDP11413 515 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 LCN1P31025 176 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 THBS2P35442 1172 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 MAP3K8P41279 467 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 OR3A2P47893 321 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRR20EP86478 221 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRR20CP86479 221 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRR20DP86480 221 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRR20BP86481 221 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRR20AP86496 221 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 ZNF117Q03924 483 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 RASGEF1BQ0VAM2 473 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 DUSP5Q16690 384 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 SMU1Q2TAY7 513 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ELOA3BQ3SY89 546 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 TIGD2Q4W5G0 525 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ANKRD26P1Q6NSI1 321 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 NOXRED1Q6NXP6 359 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 P2RY8Q86VZ1 359 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 MSRB3Q8IXL7 192 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 FBXL14Q8N1E6 418 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 TRIML2Q8N7C3 387 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ARIH2OSQ8N7S6 290 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ZNF527Q8NB42 609 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 DRAXINQ8NBI3 349 aaPredicted RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 ELOA3Q8NG57 546 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 OR52E4Q8NGH9 312 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 HOXB13Q92826 284 aaPredicted RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 EGLN2Q96KS0 407 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ZNF583Q96ND8 569 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 CGREF1Q99674 301 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PSD2Q9BQI7 771 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 C1orf50Q9BV19 199 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 CHID1Q9BWS9 393 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 CXorf36Q9H7Y0 433 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 BCO1Q9HAY6 547 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 ASIC5Q9NY37 505 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 SMPD3Q9NY59 655 aaPredicted RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 PRSS50Q9UI38 385 aa6.9□□□□□ -1.3
CLK1-215ENST00000621181 GPC6Q9Y625 555 aaPredicted RBP6.9□□□□□ -1.3
CLK1-215ENST00000621181 A0A1W2PNR3 127 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 SERTM1A2A2V5 107 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 OR5H1A6NKK0 313 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 TPST1O60507 370 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 SEC22BO75396 215 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 RAD51DO75771 328 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 CHEK2O96017 543 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ALOX5P09917 674 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 IGHV4-31P0DP07 118 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ACP2P11117 423 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 BMP4P12644 408 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 JUNBP17275 347 aaPredicted RBP6.9□□□□□ -1.31
CLK1-215ENST00000621181 HOXB9P17482 250 aaPredicted RBP6.9□□□□□ -1.31
CLK1-215ENST00000621181 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.31
CLK1-215ENST00000621181 IGHV1-2P23083 117 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 DCKP27707 260 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 FABP6P51161 128 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms