RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ANKRD16Q6P6B7 361 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 OR1K1Q8NGR3 316 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 DNAJA3Q96EY1 480 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 ZNF385AQ96PM9 386 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 C20orf27Q9GZN8 174 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 RAB1BQ9H0U4 201 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 CA10Q9NS85 328 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 CRNNQ9UBG3 495 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 A0A0G2JPF8 293 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 HNRNPCL2B2RXH8 293 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 HNRNPCL3B7ZW38 293 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 HNRNPCL1O60812 293 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 HNRNPCL4P0DMR1 293 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 ACAA2P42765 397 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 SLC25A3Q00325 362 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 C5orf46Q6UWT4 87 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 MSANTD1Q6ZTZ1 278 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 ARIH2OSQ8N7S6 290 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 MFSD8Q8NHS3 518 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 BCL2L2Q92843 193 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 RMND5AQ9H871 391 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 GPR45Q9Y5Y3 372 aa15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 YLPM1P49750 1951 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-227ENST00000602011 SVEP1Q4LDE5 3571 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 DSPPQ9NZW4 1301 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 IGHV1-18A0A0C4DH31 117 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 LOC100289279A0A1B0GTE1 492 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 RPL36A-HNRNPH2H7BZ11 118 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 HDAC3O15379 428 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 OR2T1O43869 369 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 NPIPB7O75200 414 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 APEHP13798 732 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 IDO1P14902 403 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 CDH2P19022 906 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 NCF2P19878 526 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 PPOXP50336 477 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 HIKESHIQ53FT3 197 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 C1orf140Q5VVS0 124 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 PRAMEF8Q5VWM4 474 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 PRAMEF7Q5VXH5 474 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 SLC46A3Q7Z3Q1 461 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 NET1Q7Z628 596 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 HMGN2P46Q86SG4 172 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 LSRQ86X29 649 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 NUP37Q8NFH4 326 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 NEU4Q8WWR8 484 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 TEX37Q96LM6 180 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 SPATA9Q9BWV2 254 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 PLK3Q9H4B4 646 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 C12orf10Q9HB07 376 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 THAP1Q9NVV9 213 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 RLIMQ9NVW2 624 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 ADPRHL2Q9NX46 363 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 RCE1Q9Y256 329 aa15.52■□□□□ 0.08
SHKBP1-227ENST00000602011 KLF11O14901 512 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 SLC22A3O75751 556 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 AHSA1O95433 338 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 IGLV1-44P01699 117 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 ALDOCP09972 364 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF16P17020 682 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 BGNP21810 368 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 IDH3GP51553 393 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 P2RY4P51582 365 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 GGTLC2Q14390 218 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 LIPNQ5VXI9 398 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 IL17RELQ6ZVW7 336 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 CADM2Q8N3J6 435 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 HPS1Q92902 700 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 ANKRD27Q96NW4 1050 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 FOXN4Q96NZ1 517 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 SORCS2Q96PQ0 1159 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 VRK1Q99986 396 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 RAD21L1Q9H4I0 556 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF442Q9H7R0 627 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 KCNK9Q9NPC2 374 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 PNPOQ9NVS9 261 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 PCDHB14Q9Y5E9 798 aa15.51■□□□□ 0.07
SHKBP1-227ENST00000602011 LOC102725191A0A1B0GVB3 256 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 SDHDO14521 159 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 AKAP8O43823 692 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ANP32DO95626 131 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 IGKV3-15P01624 115 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 GSNP06396 782 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 OR4A8P0C604 315 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 GKN3PP0CG01 181 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 CBR1P16152 277 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF23P17027 643 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ZNF43P17038 809 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 GTF2E2P29084 291 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 IL12AP29459 219 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 ARR3P36575 388 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 CDKN2CP42773 168 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 CRATP43155 626 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 DSTNP60981 165 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 NAAAQ02083 359 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 BST1Q10588 318 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 IQCCQ4KMZ1 466 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 PDCD4Q53EL6 469 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 COX20Q5RI15 118 aa15.5■□□□□ 0.07
SHKBP1-227ENST00000602011 NIPAL3Q6P499 406 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms