RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OR5J2Q8NH18 312 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 GGHQ92820 318 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 ERMAPQ96PL5 475 aaPredicted RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 FN3KQ9H479 309 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 SEC14L4Q9UDX3 406 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 RPH3AQ9Y2J0 694 aaPredicted RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 ADAM18Q9Y3Q7 739 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 KCNMB2Q9Y691 235 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 OR2M5A3KFT3 312 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 RFPL3SP0C7P2 107 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 TFPIP10646 304 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 RPL5P46777 297 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 RAET1LQ5VY80 246 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 SPARTQ8N0X7 666 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 ANKK1Q8NFD2 765 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 KATNB1Q9BVA0 655 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 HINT3Q9NQE9 182 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 MRPL39Q9NYK5 338 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 TAS2R5Q9NYW4 299 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 CNOT2Q9NZN8 540 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 ERVK-18Q9QC07 812 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 SSUH2Q9Y2M2 353 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 MRPS18CQ9Y3D5 142 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 CORINQ9Y5Q5 1042 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 IER3IP1Q9Y5U9 82 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 DPPA5A6NC42 116 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 PRODHO43272 600 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 IDH3BO43837 385 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 NME2P1O60361 137 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 MRPS14O60783 128 aaKnown RBP18.73■□□□□ 0.59
PNKP-203ENST00000593946 SP1P08047 785 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 CD14P08571 375 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 IMPDH2P12268 514 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 APEHP13798 732 aaKnown RBP18.73■□□□□ 0.59
PNKP-203ENST00000593946 NME2P22392 152 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 NOS3P29474 1203 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 IDUAP35475 653 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 CLK1P49759 484 aaKnown RBP18.73■□□□□ 0.59
PNKP-203ENST00000593946 MYBPHQ13203 477 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 AADACL4Q5VUY2 407 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 SULF2Q8IWU5 870 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 RELTQ969Z4 430 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 COPS4Q9BT78 406 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 TAPBPLQ9BX59 468 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 ASPNQ9BXN1 380 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 NDEL1Q9GZM8 345 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 TMEM185BQ9H7F4 350 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 KLF13Q9Y2Y9 288 aaPredicted RBP18.73■□□□□ 0.59
PNKP-203ENST00000593946 SLC6A5Q9Y345 797 aa18.73■□□□□ 0.59
PNKP-203ENST00000593946 A6NHS1 94 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 LIPT2A6NK58 231 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 RIIAD1A6NNX1 92 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 M0R082 166 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 RGS10O43665 173 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 CEACAM4O75871 244 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 DBTP11182 482 aaKnown RBP18.72■□□□□ 0.59
PNKP-203ENST00000593946 SHC1P29353 583 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 ZNF91Q05481 1191 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 NXNL2Q5VZ03 156 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 SLC25A25Q6KCM7 469 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 IGFL2Q6UWQ7 119 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 PRSS48Q7RTY5 328 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 FAM122BQ7Z309 247 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 CPOQ8IVL8 374 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 SCAIQ8N9R8 606 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 ZNF417Q8TAU3 575 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 ZNF587Q96SQ5 575 aaPredicted RBP18.72■□□□□ 0.59
PNKP-203ENST00000593946 PIGQQ9BRB3 760 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 KLHL1Q9NR64 748 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 RPL36Q9Y3U8 105 aaKnown RBP18.72■□□□□ 0.59
PNKP-203ENST00000593946 ALPK2Q86TB3 2170 aa18.72■□□□□ 0.59
PNKP-203ENST00000593946 EFCAB10A6NFE3 127 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 PLPP3O14495 311 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 IFNGP01579 166 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 PIPP12273 146 aaPredicted RBP18.71■□□□□ 0.59
PNKP-203ENST00000593946 HIST1H1CP16403 213 aaKnown RBP18.71■□□□□ 0.59
PNKP-203ENST00000593946 ZNF3P17036 446 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 ALDH3B2P48448 385 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 B3GALT5-AS1P59052 145 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 CTXN1P60606 82 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 ERVK-25P63136 954 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 ARG2P78540 354 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 OR7A5Q15622 319 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 CXXC5Q7LFL8 322 aaKnown RBP18.71■□□□□ 0.59
PNKP-203ENST00000593946 FAM83FQ8NEG4 500 aaPredicted RBP18.71■□□□□ 0.59
PNKP-203ENST00000593946 SLC39A7Q92504 469 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 MYDGFQ969H8 173 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 DTNBP1Q96EV8 351 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 OR2B2Q9GZK3 357 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 HDGFL3Q9Y3E1 203 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 PCDHGB1Q9Y5G3 927 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 FAM183AA6NL82 134 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 MT-ND2P03891 347 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 F13BP05160 661 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 CDK1P06493 297 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 ADORA3P0DMS8 318 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 CD46P15529 392 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 C19orf57Q0VDD7 668 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 PMS2P3Q13401 168 aa18.71■□□□□ 0.59
PNKP-203ENST00000593946 TOMM20Q15388 145 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms