RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ELFN2Q5R3F8 820 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ATAD3BQ5T9A4 648 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 SAXO2Q658L1 398 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 EMBQ6PCB8 327 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ZYG11AQ6WRX3 759 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 RBMS3Q6XE24 437 aaKnown RBP7.49□□□□□ -1.21
SMAD4-215ENST00000592911 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 CCDC103Q8IW40 242 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ZNF440Q8IYI8 595 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 RIBC1Q8N443 379 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ARFGAP2Q8N6H7 521 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ZDHHC22Q8N966 263 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 PPP3R2Q96LZ3 170 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 TSSK3Q96PN8 268 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 GPA33Q99795 319 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 SERHL2Q9H4I8 314 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-215ENST00000592911 OXSMQ9NWU1 459 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 MID2Q9UJV3 735 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 RASD1Q9Y272 281 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 PCDHGB1Q9Y5G3 927 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 PTGDR2Q9Y5Y4 395 aa7.49□□□□□ -1.21
SMAD4-215ENST00000592911 TMED7-TICAM2A0A0A6YYA0 188 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 IGHV2OR16-5A0A0B4J2B6 119 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 EXOC1LA0A1B0GW35 172 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 LIPT2A6NK58 231 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 AZIN1O14977 448 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 AKAP10O43572 662 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 AKAP8O43823 692 aaKnown RBP7.48□□□□□ -1.21
SMAD4-215ENST00000592911 FZD7O75084 574 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 GLRA3O75311 464 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 FSHBP01225 129 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 ADRA2AP08913 450 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 BCKDHAP12694 445 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 PRTN3P24158 256 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 GCH1P30793 250 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 CALCRP30988 508 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 RPL38P63173 70 aaKnown RBP7.48□□□□□ -1.21
SMAD4-215ENST00000592911 KCNJ10P78508 379 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 CCNIQ14094 377 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 DAG1Q14118 895 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 GNA13Q14344 377 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 GPR68Q15743 365 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 NDUFAF6Q330K2 333 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 PCGF3Q3KNV8 242 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 MIDNQ504T8 468 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 RFTN2Q52LD8 501 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-215ENST00000592911 OTUD3Q5T2D3 398 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-215ENST00000592911 C9orf135Q5VTT2 229 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 ANKRD26P1Q6NSI1 321 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 FAHD2BQ6P2I3 314 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-215ENST00000592911 C16orf62Q7Z3J2 963 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 SNX32Q86XE0 403 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 CCNYL1Q8N7R7 359 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 ZIC4Q8N9L1 334 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 FAHD2AQ96GK7 314 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 NKIRAS2Q9NYR9 191 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 KCNE5Q9UJ90 142 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 TMED7Q9Y3B3 224 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 WDR45Q9Y484 360 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 MMP24Q9Y5R2 645 aa7.48□□□□□ -1.21
SMAD4-215ENST00000592911 SLC22A23A1A5C7 686 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 POC1B-GALNT4F8VUJ3 575 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 G3V2L1 256 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 KLF11O14901 512 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 ENTPD5O75356 428 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 SKAP2O75563 359 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 RP2O75695 350 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 CYP7B1O75881 506 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 FGF4P08620 206 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 IGFBP1P08833 259 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 IMPDH2P12268 514 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 MATN1P21941 496 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 MRPS25P82663 173 aaKnown RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 SNTB2Q13425 540 aaKnown RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 ZNF311Q5JNZ3 666 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 LIPMQ5VYY2 423 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 TMEM225Q6GV28 225 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 CREB3L2Q70SY1 520 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 DOK3Q7L591 496 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 ZNF627Q7L945 461 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 GOLGA6L1Q8N7Z2 621 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 POP5Q969H6 163 aaKnown RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 OTUB1Q96FW1 271 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 AURKBQ96GD4 344 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 ZNF385AQ96PM9 386 aaKnown RBP7.47□□□□□ -1.21
SMAD4-215ENST00000592911 FMO2Q99518 471 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 TAPBPLQ9BX59 468 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 OR11A1Q9GZK7 315 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 NELFAQ9H3P2 528 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 NOX3Q9HBY0 568 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 OSGIN1Q9UJX0 560 aa7.47□□□□□ -1.21
SMAD4-215ENST00000592911 LOC102725191A0A1B0GVB3 256 aa7.46□□□□□ -1.22
SMAD4-215ENST00000592911 A8MVM7 634 aa7.46□□□□□ -1.22
SMAD4-215ENST00000592911 RNASET2O00584 256 aaKnown RBP7.46□□□□□ -1.22
SMAD4-215ENST00000592911 FCMRO60667 390 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms