RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 STMN3Q9NZ72 180 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TRPC4Q9UBN4 977 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TINAGQ9UJW2 476 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PPIEQ9UNP9 301 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 GPR52Q9Y2T5 361 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MEMO1Q9Y316 297 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ANKHD1Q8IWZ3 2542 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ABCA2Q9BZC7 2435 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 AKAP6Q13023 2319 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PRRC2AP48634 2157 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ASPDHA6ND91 283 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SYNDIG1LA6NDD5 238 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TRIM77I1YAP6 450 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF701M0R085 212 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CLOCKO15516 846 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ERI3O43414 337 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RGS14O43566 566 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 DENRO43583 198 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SCN2BO60939 215 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 EEDO75530 441 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 KRT36O76013 467 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 WISP2O76076 250 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HSPA4LO95757 839 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CLPTM1O96005 669 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TFAP2AP05549 437 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ALDOCP09972 364 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ANPEPP15144 967 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RPS2P15880 293 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TIA1P31483 386 aaKnown RBP eCLIP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZFP36L2P47974 494 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HSPA13P48723 471 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NR1H2P55055 460 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 FAM3BP58499 235 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PMP22Q01453 160 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HMGCS1Q01581 520 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RHAGQ02094 409 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 LRRC74AQ0VAA2 488 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 BIKQ13323 160 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TSTA3Q13630 321 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RGS21Q2M5E4 152 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CCDC58Q4VC31 144 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SLC9B1Q4ZJI4 515 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ACER2Q5QJU3 275 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 FAM71E1Q6IPT2 247 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NOXRED1Q6NXP6 359 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 H3F3CQ6NXT2 135 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TRIM40Q6P9F5 258 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 IZUMO2Q6UXV1 221 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MEX3BQ6ZN04 569 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 QSOX2Q6ZRP7 698 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 COMMD6Q7Z4G1 85 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 GPR141Q7Z602 305 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SATL1Q86VE3 508 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CRLF3Q8IUI8 442 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 FAM9CQ8IZT9 166 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 EID3Q8N140 333 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MARVELD2Q8N4S9 558 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MDS2Q8NDY4 140 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 OR52N4Q8NGI2 321 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CEP70Q8NHQ1 597 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PSMA8Q8TAA3 256 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 BORCS5Q969J3 196 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SCMH1Q96GD3 660 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NSL1Q96IY1 281 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF354BQ96LW1 612 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PPP3R2Q96LZ3 170 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF681Q96N22 645 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TMEM120AQ9BXJ8 343 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TRIM15Q9C019 465 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 KCNN2Q9H2S1 579 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RAD21L1Q9H4I0 556 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 Q9H521 79 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF696Q9H7X3 374 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SP140LQ9H930 580 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MARCH7Q9H992 704 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ANKHQ9HCJ1 492 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SPAG4Q9NPE6 437 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 DIABLOQ9NR28 239 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SDR39U1Q9NRG7 319 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 C1orf109Q9NX04 203 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 AHSPQ9NZD4 102 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NAALAD2Q9Y3Q0 740 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ATG4BQ9Y4P1 393 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PTGDR2Q9Y5Y4 395 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF407Q9C0G0 2248 aa4.35□□□□□ -1.71
KARSP3-201ENST00000571212 ACANP16112 2415 aa4.35□□□□□ -1.71
KARSP3-201ENST00000571212 A0A0A6YYC8 382 aaPredicted RBP4.35□□□□□ -1.71
KARSP3-201ENST00000571212 TRPC5OSA6NMA1 111 aa4.35□□□□□ -1.71
KARSP3-201ENST00000571212 NPIPA5E9PKD4 350 aa4.35□□□□□ -1.71
KARSP3-201ENST00000571212 I3L1I5 382 aaPredicted RBP4.35□□□□□ -1.71
KARSP3-201ENST00000571212 SGK494L7N484 410 aa4.35□□□□□ -1.71
KARSP3-201ENST00000571212 RTCAO00442 366 aaKnown RBP4.35□□□□□ -1.71
KARSP3-201ENST00000571212 GYG2O15488 501 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms