RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 MED18Q9BUE0 208 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 PLSCR4Q9NRQ2 329 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 HEATR5AQ86XA9 2040 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 IGHV3-15A0A0B4J1V0 119 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 AP3D1O14617 1153 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 CASQ2O14958 399 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 TPST2O60704 377 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 ENPP1P22413 925 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 RAC3P60763 192 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 POU4F3Q15319 338 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 OR2T5Q6IEZ7 315 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 RANBP3LQ86VV4 465 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 CDC20BQ86Y33 519 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 OR2T29Q8NH02 315 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 RNF128Q8TEB7 428 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 SLC25A43Q8WUT9 341 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 WFIKKN1Q96NZ8 548 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 PIP5K1AQ99755 562 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 POLR2J2Q9GZM3 115 aaKnown RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 COQ10BQ9H8M1 238 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 FANCFQ9NPI8 374 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 CTPS2Q9NRF8 586 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF226Q9NYT6 803 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 TESQ9UGI8 421 aaKnown RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 PRDM4Q9UKN5 801 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 EDARQ9UNE0 448 aa12.9□□□□□ -0.34
COMMD4-225ENST00000569245 FAM32AQ9Y421 112 aaKnown RBP12.9□□□□□ -0.34
COMMD4-225ENST00000569245 CCDC168Q8NDH2 2452 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 SULT2B1O00204 365 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 FRS3O43559 492 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 AGTR1P30556 359 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
COMMD4-225ENST00000569245 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
COMMD4-225ENST00000569245 HTR3AP46098 478 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 CSNK2A1P68400 391 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-225ENST00000569245 GK3PQ14409 553 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 SNCBQ16143 134 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 ANKRD34AQ69YU3 496 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 AMIGO2Q86SJ2 522 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 SLC43A2Q8N370 569 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
COMMD4-225ENST00000569245 DHRS1Q96LJ7 313 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 PRRC1Q96M27 445 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 MCHR1Q99705 422 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 CHRNA9Q9UGM1 479 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 TESMINQ9Y4I5 508 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 MED12LQ86YW9 2145 aa12.89□□□□□ -0.35
COMMD4-225ENST00000569245 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 TMED7-TICAM2A0A0A6YYA0 188 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 FAM221AA4D161 298 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 J3KTA2 159 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 FAAHO00519 579 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 GNGT2O14610 69 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 FFAR1O14842 300 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 DIRAS1O95057 198 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 YES1P07947 543 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 GKN3PP0CG01 181 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 PRG2P13727 222 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 YAP1P46937 504 aaKnown RBP12.88□□□□□ -0.35
COMMD4-225ENST00000569245 PCYT1AP49585 367 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 DIO1P49895 249 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 HMGA2P52926 109 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 EPS8Q12929 822 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 TMPPEQ6ZT21 453 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 BEND4Q6ZU67 534 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 LSMEM1Q8N8F7 131 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 DNAJA3Q96EY1 480 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 NRBF2Q96F24 287 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 SEMA6AQ9H2E6 1030 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
COMMD4-225ENST00000569245 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
COMMD4-225ENST00000569245 ADAM11O75078 769 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 OR5F1O95221 314 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 GOSR1O95249 250 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 THRBP10828 461 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 HTR2AP28223 471 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 TACR3P29371 465 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 RRM2P31350 389 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 IFNA8P32881 189 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 SLC1A3P43003 542 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 LIMS1P48059 325 aa12.87□□□□□ -0.35
COMMD4-225ENST00000569245 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
COMMD4-225ENST00000569245 SMIM11AP58511 58 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms