RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 IGHV3-43DP0DP04 118 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 NPR2P20594 1047 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 CMA1P23946 247 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 YWHABP31946 246 aaKnown RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 COPB2P35606 906 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 GYG1P46976 350 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 DAP3P51398 398 aaKnown RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 HSPA2P54652 639 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 HSD17B7P56937 341 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 RAP1AP62834 184 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 PITPNAQ00169 270 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 LASP1Q14847 261 aaKnown RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 MAPK6Q16659 721 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 TRIM16LQ309B1 348 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 SASS6Q6UVJ0 657 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 Q6ZS52 159 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 NLRP9Q7RTR0 991 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 BIVMQ86UB2 503 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 GRAMD2AQ8IUY3 354 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 LGI3Q8N145 548 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 RNF148Q8N7C7 305 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 URGCPQ8TCY9 931 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 RNF139Q8WU17 664 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 FGF11Q92914 225 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 PAGE5Q96GU1 130 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 DOK1Q99704 481 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 ECSITQ9BQ95 431 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 ALG12Q9BV10 488 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 ATG10Q9H0Y0 220 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 LHX5Q9H2C1 402 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 CWC25Q9NXE8 425 aaPredicted RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 AATFQ9NY61 560 aaKnown RBP eCLIP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 STAP1Q9ULZ2 295 aa0.75□□□□□ -2.29
FOXN3-216ENST00000557496 F11RQ9Y624 299 aaKnown RBP0.75□□□□□ -2.29
FOXN3-216ENST00000557496 PHF3Q92576 2039 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 FRMPD4Q14CM0 1322 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 IGHV5-10-1A0A0J9YXX1 117 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 TMEM223A0PJW6 202 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RBMY1BA6NDE4 496 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RBMY1EA6NEQ0 496 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 C12orf71A8MTZ7 269 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 C12orf77C9JDV5 145 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 KINO60870 393 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 IL4P05112 153 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 GLAP06280 429 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RBMY1DP0C7P1 496 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RBMY1A1P0DJD3 496 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 IGHV1-8P0DP01 117 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ABOP16442 354 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 MUTP22033 750 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 CALCRP30988 508 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 CRISP1P54107 249 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 FGF8P55075 233 aaPredicted RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RPS14P62263 151 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 GABPB1Q06547 395 aaPredicted RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 BAMBIQ13145 260 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 RPA4Q13156 261 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 COA6Q5JTJ3 125 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ARMC3Q5W041 872 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 Q6ZN92 141 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 GET4Q7L5D6 327 aaPredicted RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 SLC26A11Q86WA9 606 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 TRIM69Q86WT6 500 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 CBWD2Q8IUF1 395 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 OR10G4Q8NGN3 311 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 OR1N2Q8NGR9 330 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 GIPC3Q8TF64 312 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 NEURL3Q96EH8 262 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 AURKBQ96GD4 344 aaPredicted RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 HPDLQ96IR7 371 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ITCHQ96J02 903 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 WFIKKN1Q96NZ8 548 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF717Q9BY31 904 aaPredicted RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 C12orf10Q9HB07 376 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 AIPL1Q9NZN9 384 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 CD84Q9UIB8 345 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 SIGLEC9Q9Y336 463 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 STRAPQ9Y3F4 350 aaKnown RBP0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ALG6Q9Y672 507 aa0.74□□□□□ -2.29
FOXN3-216ENST00000557496 ABCC4O15439 1325 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 RPGRIP1LQ68CZ1 1315 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 ARHGAP42A6NI28 874 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 G3V4G9 280 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 SGK1O00141 431 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 RAD51BO15315 384 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 CHST1O43916 411 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 CXCL13O43927 109 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TRIM16O95361 564 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 PGCP20142 388 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TPSB2P20231 275 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TBXA2RP21731 343 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 AHCYP23526 432 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TGFBR1P36897 503 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 LOXL1Q08397 574 aaPredicted RBP0.73□□□□□ -2.29
FOXN3-216ENST00000557496 ZNF616Q08AN1 781 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 IL15RAQ13261 267 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TPSAB1Q15661 275 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TTLL9Q3SXZ7 439 aa0.73□□□□□ -2.29
FOXN3-216ENST00000557496 TMEM225Q6GV28 225 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms