RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 CYB561A3Q8NBI2 242 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 ANKK1Q8NFD2 765 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 ZNF417Q8TAU3 575 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 ZNF587Q96SQ5 575 aaPredicted RBP17.22■□□□□ 0.35
SNRPN-207ENST00000554227 FAM173AQ9BQD7 235 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 TAPBPLQ9BX59 468 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 HCAR1Q9BXC0 346 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 ZFP64Q9NPA5 681 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 NRIP3Q9NQ35 241 aa17.22■□□□□ 0.35
SNRPN-207ENST00000554227 MGAQ8IWI9 3026 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 SH3D21A4FU49 640 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 CLCA1A8K7I4 914 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 TRAPPC6AO75865 159 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 MT-ND2P03891 347 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 SP1P08047 785 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 HIST1H1CP16403 213 aaKnown RBP17.21■□□□□ 0.35
SNRPN-207ENST00000554227 SRD5A2P31213 254 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 B3GALT5-AS1P59052 145 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 CTXN1P60606 82 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 ARG2P78540 354 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 MYBPHQ13203 477 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 TMEM176BQ3YBM2 270 aaPredicted RBP17.21■□□□□ 0.35
SNRPN-207ENST00000554227 SLC25A30Q5SVS4 291 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 SLC25A25Q6KCM7 469 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 C3orf33Q6P1S2 294 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 PLBD1Q6P4A8 553 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 DPY19L2P2Q6ZN68 376 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 GALNTL5Q7Z4T8 443 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 GHDCQ8N2G8 530 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 KDM8Q8N371 416 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 OR5J2Q8NH18 312 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 OR4K13Q8NH42 304 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 RASD2Q96D21 266 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 Q96MT0 163 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 OR5B2Q96R09 309 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 COPS4Q9BT78 406 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 PRRG3Q9BZD7 231 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■□□□ 13.3
SNRPN-207ENST00000554227 CMC2Q9NRP2 79 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 FKBP14Q9NWM8 211 aa17.21■□□□□ 0.35
SNRPN-207ENST00000554227 URB1O60287 2271 aaKnown RBP17.21■□□□□ 0.34
SNRPN-207ENST00000554227 IMPA2O14732 288 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 OR2T1O43869 369 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 SERPINI2O75830 405 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 STSP08842 583 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 ADORA3P0DMS8 318 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 C21orf33P30042 268 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 IDUAP35475 653 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 CSNK2BP67870 215 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 TUBA4AP68366 448 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 PMS2P3Q13401 168 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 AADACL4Q5VUY2 407 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 C5orf46Q6UWT4 87 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 KCTD8Q6ZWB6 473 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 FAM83FQ8NEG4 500 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 OR52E2Q8NGJ4 325 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 MFSD8Q8NHS3 518 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 HAS2Q92819 552 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 TMIGD2Q96BF3 282 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 Q96M85 177 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 POTEKPQ9BYX7 375 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 A6NHS1 94 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 LIPT2A6NK58 231 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 KDM4EB2RXH2 506 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 RGS10O43665 173 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 NME2P1O60361 137 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 PLGP00747 810 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 NME2P22392 152 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 AHCYP23526 432 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 GDF1P27539 372 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 MAP2K4P45985 399 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 ZNF91Q05481 1191 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 SELENBP1Q13228 472 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 CRMP1Q14194 572 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 NEDD8Q15843 81 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 SGCBQ16585 318 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 WIPI1Q5MNZ9 446 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 B3GLCTQ6Y288 498 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 CXXC5Q7LFL8 322 aaKnown RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 SATL1Q86VE3 508 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 SDR9C7Q8NEX9 313 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 OR14L1PQ8NHC6 308 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 PTP4A1Q93096 173 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 GPX7Q96SL4 187 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 BOKQ9UMX3 212 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-207ENST00000554227 BAIAP2Q9UQB8 552 aa17.2■□□□□ 0.34
SNRPN-207ENST00000554227 PLPP3O14495 311 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 AKR7A3O95154 331 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 APOL3O95236 402 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 CD14P08571 375 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 CLUP10909 449 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 DBTP11182 482 aaKnown RBP17.19■□□□□ 0.34
SNRPN-207ENST00000554227 SLC15A1P46059 708 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 RPL5P46777 297 aaKnown RBP17.19■□□□□ 0.34
SNRPN-207ENST00000554227 MAP2K6P52564 334 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 ST3GAL4Q11206 333 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 ITGADQ13349 1161 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.19■□□□□ 0.343e-9■□□□□ 10.7
SNRPN-207ENST00000554227 NADK2Q4G0N4 442 aa17.19■□□□□ 0.34
SNRPN-207ENST00000554227 MEDAGQ5VYS4 303 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms