RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 PANX1Q96RD7 426 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 VRK1Q99986 396 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 TMEM120AQ9BXJ8 343 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 RMND5AQ9H871 391 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 CFAP73A6NFT4 308 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 HAX1O00165 279 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 NR5A2O00482 541 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 CHRM4P08173 479 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 NR2F1P10589 423 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 APEHP13798 732 aaKnown RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 IGFBP5P24593 272 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 CXCR1P25024 350 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 IL12AP29459 219 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 SLC1A3P43003 542 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 LRRC74AQ0VAA2 488 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 IQCCQ4KMZ1 466 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 C6orf10Q5SRN2 563 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 MRPL2Q5T653 305 aaKnown RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 VHLLQ6RSH7 139 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 PAQR6Q6TCH4 344 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 CMIPQ8IY22 773 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 CADM2Q8N3J6 435 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 TMEM99Q8N816 258 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 ANKS4BQ8N8V4 417 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 OR9K2Q8NGE7 335 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 OR9I1Q8NGQ6 314 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF385AQ96PM9 386 aaKnown RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 SORCS2Q96PQ0 1159 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 TRNT1Q96Q11 434 aaKnown RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 FAM107BQ9H098 131 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 NSRP1Q9H0G5 558 aaKnown RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 SLC38A1Q9H2H9 487 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 RABEP2Q9H5N1 569 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 SDR39U1Q9NRG7 319 aaPredicted RBP10.02□□□□□ -0.81
RAB5C-203ENST00000546881 ADPRHL2Q9NX46 363 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
RAB5C-203ENST00000546881 PLCE1Q9P212 2302 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 IGHV1-18A0A0C4DH31 117 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 SLC35F4A4IF30 521 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 CCDC154A6NI56 674 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 AGAP5A6NIR3 686 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 RFXANKO14593 260 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 LGI1O95970 557 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 GSNP06396 782 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 GPIP06744 558 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 GKN3PP0CG01 181 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 HNF1AP20823 631 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 NR4A2P43354 598 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 ANXA11P50995 505 aaKnown RBP10.01□□□□□ -0.81
RAB5C-203ENST00000546881 UBE2NP61088 152 aaKnown RBP10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TUBA1BP68363 451 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TUBA4AP68366 448 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 GABPB1Q06547 395 aaPredicted RBP10.01□□□□□ -0.81
RAB5C-203ENST00000546881 LGALS3BPQ08380 585 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 EPS8Q12929 822 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 BNIP2Q12982 314 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 MST1LQ2TV78 715 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 AGKQ53H12 422 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TMEM225Q6GV28 225 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 LRRC74BQ6ZQY2 392 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF621Q6ZSS3 439 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TUBA1AQ71U36 451 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 ABHD12BQ7Z5M8 362 aaPredicted RBP10.01□□□□□ -0.81
RAB5C-203ENST00000546881 POMGNT2Q8NAT1 580 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TMEM45BQ96B21 275 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 ITCHQ96J02 903 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 FOXN4Q96NZ1 517 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 SLC38A2Q96QD8 506 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 C19orf24Q9BVV8 132 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TAPBPLQ9BX59 468 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 CCDC134Q9H6E4 229 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 TMEM45AQ9NWC5 275 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 BTNL2Q9UIR0 455 aa10.01□□□□□ -0.81
RAB5C-203ENST00000546881 HEATR1Q9H583 2144 aaKnown RBP10□□□□□ -0.81
RAB5C-203ENST00000546881 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 LIPT2A6NK58 231 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 ZNF587BE7ETH6 402 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 NDUFS8O00217 210 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 TGFAP01135 160 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 CRYAAP02489 173 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 DBIP07108 87 aaKnown RBP10□□□□□ -0.81
RAB5C-203ENST00000546881 SERPINF1P36955 418 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 CDKN2CP42773 168 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 SELENOPP49908 381 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 ATP4BP51164 291 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 COPZ1P61923 177 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 GNGT1P63211 74 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 SWI5Q1ZZU3 235 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 TBRG1Q3YBR2 411 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 COX20Q5RI15 118 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 NIPAL3Q6P499 406 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 VRK2Q86Y07 508 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 PEX5LQ8IYB4 626 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 ZIC4Q8N9L1 334 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 OR1K1Q8NGR3 316 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 VPS33AQ96AX1 596 aa10□□□□□ -0.81
RAB5C-203ENST00000546881 MSI2Q96DH6 328 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms