RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 GPIP06744 558 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 HNRNPCL4P0DMR1 293 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 USF1P22415 310 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-206ENST00000543881 PTAFRP25105 342 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 TTKP33981 857 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 LSM11P83369 360 aaKnown RBP eCLIP10.37□□□□□ -0.75
GABPB1-206ENST00000543881 HOXC5Q00444 222 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 LGALS3BPQ08380 585 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 RGNQ15493 299 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 FAM120AOSQ5T036 256 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 WBP2NLQ6ICG8 309 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 SLC22A25Q6T423 547 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 FUNDC1Q8IVP5 155 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 MIER2Q8N344 545 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 OR9K2Q8NGE7 335 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 C10orf105Q8TEF2 133 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 MAL2Q969L2 176 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 TMEM45BQ96B21 275 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 C3orf49Q96BT1 292 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 RADILQ96JH8 1075 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 SPATA9Q9BWV2 254 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 CHODLQ9H9P2 273 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 SLC17A5Q9NRA2 495 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 CBLN4Q9NTU7 201 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 PARPBPQ9NWS1 579 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 SLC25A37Q9NYZ2 338 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 UPB1Q9UBR1 384 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
GABPB1-206ENST00000543881 SVEP1Q4LDE5 3571 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 A8MVM7 634 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 TMEM229AB2RXF0 380 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 CLIC1O00299 241 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 BMP2P12643 396 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 GZMKP49863 264 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 LARS2Q15031 903 aaKnown RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 LIPNQ5VXI9 398 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 FAM166AQ6J272 317 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 AAED1Q7RTV5 226 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 GPAT4Q86UL3 456 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 COMTD1Q86VU5 262 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 MSRB3Q8IXL7 192 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 C10orf111Q8N326 155 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 C1orf162Q8NEQ5 155 aaPredicted RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 PROX1Q92786 737 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 DHRS9Q9BPW9 319 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 EBF4Q9BQW3 602 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 SF3B5Q9BWJ5 86 aaKnown RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 A4GALTQ9NPC4 353 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 SLCO1B3Q9NPD5 702 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 SLC52A3Q9NQ40 469 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 ADPRHL2Q9NX46 363 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 SLAMF8Q9P0V8 285 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 KCNS2Q9ULS6 477 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 MGAT4BQ9UQ53 548 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 CDH2P19022 906 aaPredicted RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 HNF1AP20823 631 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 MPGP29372 298 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 MRPL19P49406 292 aaKnown RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 IDH3AP50213 366 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 COPZ1P61923 177 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 EGR4Q05215 589 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 ZNF311Q5JNZ3 666 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 C1orf140Q5VVS0 124 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 CREB3L2Q70SY1 520 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 LINGO2Q7L985 606 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 EPHX4Q8IUS5 362 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 MUC15Q8N387 334 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 C17orf78Q8N4C9 275 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 C7orf26Q96N11 449 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 PTDSS2Q9BVG9 487 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 BCL2L10Q9HD36 194 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 THUMPD1Q9NXG2 353 aaKnown RBP10.36□□□□□ -0.75
GABPB1-206ENST00000543881 POU2F3Q9UKI9 436 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
GABPB1-206ENST00000543881 A0A096LPI6 279 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 LOC100289279A0A1B0GTE1 492 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 FTCDNL1E5RQL4 147 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 H7C417 338 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 ERLIN1O75477 346 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 CSF3P09919 207 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 NCF2P19878 526 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-206ENST00000543881 SELENOPP49908 381 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 FABP6P51161 128 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 TGFBR3Q03167 851 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 ZSWIM7Q19AV6 140 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 HIKESHIQ53FT3 197 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 PAGE3Q5JUK9 113 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 LRIF1Q5T3J3 769 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 AGBL2Q5U5Z8 902 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 TMEM225Q6GV28 225 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 KDM8Q8N371 416 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 POMGNT2Q8NAT1 580 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 KTI12Q96EK9 354 aaPredicted RBP10.35□□□□□ -0.75
GABPB1-206ENST00000543881 BOD1Q96IK1 185 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 TAPBPLQ9BX59 468 aa10.35□□□□□ -0.75
GABPB1-206ENST00000543881 PLA2G12AQ9BZM1 189 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms