RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 ZMYND11Q15326 602 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SLC15A2Q16348 729 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 CCDC57Q2TAC2 916 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 TSPO2Q5TGU0 170 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 PDPK2PQ6A1A2 396 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SLC25A24Q6NUK1 477 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 AFTPHQ6ULP2 937 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 WDR88Q6ZMY6 472 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 RABEPKQ7Z6M1 372 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 DNAAF3Q8N9W5 541 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 ZSCAN4Q8NAM6 433 aaPredicted RBP2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 M1APQ8TC57 530 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 DDI1Q8WTU0 396 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 FAM151AQ8WW52 585 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 TPD52L3Q96J77 140 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 CYP2S1Q96SQ9 504 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SH3GL3Q99963 347 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 WRAP53Q9BUR4 548 aaKnown RBP2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 RSPO3Q9BXY4 272 aaPredicted RBP2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SRXN1Q9BYN0 137 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 CRNKL1Q9BZJ0 848 aaKnown RBP2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 HSD3B7Q9H2F3 369 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 PPDPFQ9H3Y8 114 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SYNDIG1Q9H7V2 258 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 RAB20Q9NX57 234 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 TMOD2Q9NZR1 351 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 CD300AQ9UGN4 299 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 DCDC2Q9UHG0 476 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 PRPF19Q9UMS4 504 aaKnown RBP2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 SNX6Q9UNH7 406 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 CACNA1AO00555 2505 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 GLI3P10071 1580 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 ARHGAP5Q13017 1502 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 ASXL1Q8IXJ9 1541 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 RGPD1P0DJD0 1748 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 WDR90Q96KV7 1748 aa2.51□□□□□ -2.01
UBE2D3-225ENST00000508476 MYO3BQ8WXR4 1341 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 ERICH2A1L162 156 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RNF222A6NCQ9 220 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 FAM47DPA6NHR8 397 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 OR6C65A6NJZ3 312 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RASGRF2O14827 1237 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RHOBTB1O94844 696 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 CSF2P04141 144 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RPSAP08865 295 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 ANXA3P12429 323 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 GLRA2P23416 452 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 BMI1P35226 326 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 MNAT1P51948 309 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 ATXN3P54252 364 aaPredicted RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 PRRX1P54821 245 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 HADHBP55084 474 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 ATP5IP56385 69 aaPredicted RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 CSNK1G2P78368 415 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 MOBPQ13875 183 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SNCBQ16143 134 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 KCTD21Q4G0X4 260 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RIPPLY2Q5TAB7 128 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 HHATQ5VTY9 493 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 NEK5Q6P3R8 708 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 WDR74Q6RFH5 385 aaPredicted RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 C6orf89Q6UWU4 347 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 LRRC31Q6UY01 552 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RBM43Q6ZSC3 357 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 NANOGNBQ7Z5D8 188 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 LINC01551Q86U37 167 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 VPS36Q86VN1 386 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 C12orf56Q8IXR9 622 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SLC7A5P1Q8MH63 180 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SYCE1Q8N0S2 351 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 TCAIMQ8N3R3 496 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 OR13C2Q8NGS9 318 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 LILRB4Q8NHJ6 448 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SLC13A3Q8WWT9 602 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 RAB7BQ96AH8 199 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SGK3Q96BR1 496 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 CCT7Q99832 543 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 THUMPD2Q9BTF0 503 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 AZI2Q9H6S1 392 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 AGPAT5Q9NUQ2 364 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 NINJ2Q9NZG7 142 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 APPL1Q9UKG1 709 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 ANGPTL2Q9UKU9 493 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 C15orf41Q9Y2V0 281 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 STRAPQ9Y3F4 350 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 COMMD3-BMI1R4GMX3 469 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SPACA6W5XKT8 324 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 SLIT2O94813 1529 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 KIDINS220Q9ULH0 1771 aa2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 NUP153P49790 1475 aaKnown RBP2.5□□□□□ -2.01
UBE2D3-225ENST00000508476 MAST1Q9Y2H9 1570 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 SLIT1O75093 1534 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 SLIT3O75094 1523 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 XKRY2A2RUG3 117 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 FAM74A7A6NL05 159 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 LRRC30A6NM36 301 aa2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 TRDMT1O14717 391 aaKnown RBP2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 ZNF780AO75290 641 aaPredicted RBP2.49□□□□□ -2.01
UBE2D3-225ENST00000508476 WBP4O75554 376 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms