RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	NPTX1	Q15818	432 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NRF1	Q16656	503 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ENTPD8	Q5MY95	495 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TSPO2	Q5TGU0	170 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ERICH5	Q6P6B1	374 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CCDC80	Q76M96	950 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CPLX4	Q7Z7G2	160 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TREML1	Q86YW5	311 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C10orf53	Q8N6V4	93 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR4D11	Q8NGI4	311 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NSRP1	Q9H0G5	558 aa	Known RBP	12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	EVA1A	Q9H8M9	152 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NGB	Q9NPG2	151 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC7A10	Q9NS82	523 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RASD1	Q9Y272	281 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ROS1	P08922	2347 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TRAV36DV7	A0A075B6V5	113 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459		A0A1W2PR80	420 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459		M0R082	166 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR2T1	O43869	369 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	KRT33A	O76009	404 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	VAMP5	O95183	116 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GRPR	P30550	384 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	LSP1	P33241	339 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CRYBA2	P53672	197 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NR1H2	P55055	460 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GNGT1	P63211	74 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	VEZF1	Q14119	521 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PPA1	Q15181	289 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ACKR1	Q16570	336 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	LRRC23	Q53EV4	343 aa	Predicted RBP	12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FAM69A	Q5T7M9	428 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C5orf46	Q6UWT4	87 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CREB3L2	Q70SY1	520 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR2T12	Q8NG77	320 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF417	Q8TAU3	575 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RASSF5	Q8WWW0	418 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PROX1	Q92786	737 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TMEM45B	Q96B21	275 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	MUCL1	Q96DR8	90 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	EPYC	Q99645	322 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FOXC2	Q99958	501 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	USB1	Q9BQ65	265 aa	Known RBP	12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CMTM6	Q9NX76	183 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TAS2R16	Q9NYV7	291 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GMPR2	Q9P2T1	348 aa	Known RBP	12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	MALT1	Q9UDY8	824 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SH3GLB1	Q9Y371	365 aa		12.47	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GMNC	A6NCL1	334 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FAM220BP	B1ANY3	271 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CLOCK	O15516	846 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FMO6P	O60774	539 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SHOX2	O60902	331 aa	Predicted RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ITGA5	P08648	1049 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NQO1	P15559	274 aa	Known RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF43	P17038	809 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CDH2	P19022	906 aa	Predicted RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CD53	P19397	219 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TNFRSF1B	P20333	461 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	DRD4	P21917	467 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SELENOP	P49908	381 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FOXD4	Q12950	439 aa	Predicted RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C1D	Q13901	141 aa	Known RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	DEFB113	Q30KQ7	82 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TIMM23B	Q5SRD1	257 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NIPAL3	Q6P499	406 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF613	Q6PF04	617 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CARM1	Q86X55	608 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	EPHX4	Q8IUS5	362 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	MICU2	Q8IYU8	434 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR52N5	Q8NH56	324 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ADAMTS16	Q8TE57	1224 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLCO5A1	Q9H2Y9	848 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ESRP2	Q9H6T0	727 aa	Known RBP	12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	EFCAB1	Q9HAE3	211 aa		12.46	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ELOVL7	A1L3X0	281 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	OR5H1	A6NKK0	313 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	LRRN3	E7EW58	273 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	CHP2	O43745	196 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	SNX3	O60493	162 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	IFNA14	P01570	189 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	CD3E	P07766	207 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	NUDT2	P50583	147 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	CLDN17	P56750	224 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	LIPE	Q05469	1076 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	LTB	Q06643	244 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	LGALS3BP	Q08380	585 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	NCMAP	Q5T1S8	102 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	SWT1	Q5T5J6	900 aa	Known RBP	12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	SPNS3	Q6ZMD2	512 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	DEF8	Q6ZN54	512 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	H1FNT	Q75WM6	255 aa	Predicted RBP	12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	ARPIN	Q7Z6K5	226 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	P2RY8	Q86VZ1	359 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	SLC15A3	Q8IY34	581 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	MBD6	Q96DN6	1003 aa		12.45	□□□□□ -0.42
CCHCR1-222	ENST00000507459	TPD52L3	Q96J77	140 aa		12.45	□□□□□ -0.42

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