RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 OR4Q3Q8NH05 313 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 SGCDQ92629 289 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 YIPF6Q96EC8 236 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 IMMP1LQ96LU5 166 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 RASL10BQ96S79 203 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 GPX7Q96SL4 187 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 MGLLQ99685 303 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 ASPNQ9BXN1 380 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 AKIRIN1Q9H9L7 192 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 LIN28AQ9H9Z2 209 aaKnown RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TNFRSF10DQ9UBN6 386 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 SEC14L4Q9UDX3 406 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 EXOGQ9Y2C4 368 aaKnown RBP9.32□□□□□ -0.92
HDAC3-214ENST00000495485 HIF3AQ9Y2N7 669 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 TMED7Q9Y3B3 224 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 HS3ST3B1Q9Y662 390 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 EXPH5Q8NEV8 1989 aa9.32□□□□□ -0.92
HDAC3-214ENST00000495485 BSNQ9UPA5 3926 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 CFAP46Q8IYW2 2715 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 BLOC1S5-TXNDC5H3BN57 136 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ZNF208O43345 1280 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 AIREO43918 545 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ADAM11O75078 769 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ITGA10O75578 1167 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 GABARAPO95166 117 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 HSMCR30P0CW71 290 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 PSMA1P25786 263 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 EIF1P41567 113 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 CENPAP49450 140 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 WNT4P56705 351 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 RPS7P62081 194 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ACTC1P68032 377 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ACTA1P68133 377 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 AIMP2Q13155 320 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ITGADQ13349 1161 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ZNF74Q16587 644 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 DGUOKQ16854 277 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 SLC35D3Q5M8T2 416 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 FAM69AQ5T7M9 428 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 JMJD6Q6NYC1 403 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 LINC00299Q6ZSB3 139 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 RPS19BP1Q86WX3 136 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 KLHL36Q8N4N3 616 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 OR11G2Q8NGC1 345 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 OR52I1Q8NGK6 324 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 OR5M3Q8NGP4 307 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ZFAND2BQ8WV99 257 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 LGALS12Q96DT0 336 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 RNF31Q96EP0 1072 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 MRGPRX4Q96LA9 322 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 UBL7Q96S82 380 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 TAPBPLQ9BX59 468 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 JAM3Q9BX67 310 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 MCCC2Q9HCC0 563 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 HPF1Q9NWY4 346 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 ABI3Q9P2A4 366 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 TEKT2Q9UIF3 430 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 OSGIN1Q9UJX0 560 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 GPR52Q9Y2T5 361 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 PCDHGA9Q9Y5G4 932 aaKnown RBP9.31□□□□□ -0.92
HDAC3-214ENST00000495485 CORINQ9Y5Q5 1042 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 IER3IP1Q9Y5U9 82 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 WIF1Q9Y5W5 379 aa9.31□□□□□ -0.92
HDAC3-214ENST00000495485 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
HDAC3-214ENST00000495485 A0A087WZY1 265 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 IGLV3-32A0A0A0MS00 114 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 TMEM200CA6NKL6 621 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 MKRN2OSH3BPM6 223 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SOCS6O14544 535 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 NKX2-8O15522 239 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SUSD5O60279 629 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SNX4O95219 450 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 PPP1R3DO95685 299 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 RENP00797 406 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SCG5P05408 212 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 LCKP06239 509 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 CD14P08571 375 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 TSPAN19P0C672 248 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 PTNP21246 168 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 ADH6P28332 368 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 OTX2P32243 289 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 RGS6P49758 472 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SLC16A1P53985 500 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 MLLT10P55197 1068 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 DLX5P56178 289 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 RPS4XP62701 263 aaKnown RBP9.3□□□□□ -0.92
HDAC3-214ENST00000495485 NFATC3Q12968 1075 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 MLLT11Q13015 90 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-214ENST00000495485 CHAF1BQ13112 559 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 IL10RAQ13651 578 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 PON3Q15166 354 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 ZNF791Q3KP31 576 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-214ENST00000495485 KLHL12Q53G59 568 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 ALG10Q5BKT4 473 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 SLC35F1Q5T1Q4 408 aa9.3□□□□□ -0.92
HDAC3-214ENST00000495485 C1orf140Q5VVS0 124 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms