RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ZNF716A6NP11 495 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF724A8MTY0 619 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 E7EQL1 145 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NPIPB6E9PJ23 425 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 HMGN4O00479 90 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 AP3D1O14617 1153 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ABCD4O14678 606 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ANKRD28O15084 1053 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SSX4O60224 188 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TMEM127O75204 238 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CRLF1O75462 422 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SOX30O94993 753 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 PGM3O95394 542 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 FESP07332 822 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 KRT16P08779 473 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NUDT17P0C025 328 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 GKN3PP0CG01 181 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CDH2P19022 906 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 GGT1P19440 569 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 PGCP20142 388 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 BGNP21810 368 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 UQCRC2P22695 453 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 IL12AP29459 219 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 APOBEC1P41238 236 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC1A6P48664 564 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RPL14P50914 215 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF83P51522 516 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SUMO3P55854 103 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 OR2B6P58173 313 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 LINC00310P59036 64 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 UFM1P61960 85 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 IRX1P78414 480 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 KCNJ10P78508 379 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 FUT5Q11128 374 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 BNIP2Q12982 314 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CASP8Q14790 479 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 P2RY6Q15077 328 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF124Q15973 351 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SYPL1Q16563 259 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 GPAT3Q53EU6 434 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SYT14P1Q58G82 188 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SPANXN4Q5MJ08 99 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 XP32Q5T750 250 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 HEPHL1Q6MZM0 1159 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 BHLHB9Q6PI77 547 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 FRRS1Q6ZNA5 592 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 Q6ZT83 130 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 EIF3MQ7L2H7 374 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CXXC5Q7LFL8 322 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RNF130Q86XS8 419 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CNPY4Q8N129 248 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RIBC1Q8N443 379 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NATD1Q8N6N6 113 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ANKFN1Q8N957 763 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 OR8J2Q8NGG1 315 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 OR52E4Q8NGH9 312 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 PNPT1Q8TCS8 783 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 AENQ8WTP8 325 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TMEM234Q8WY98 164 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ST8SIA1Q92185 356 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CNOT9Q92600 299 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 MOAP1Q96BY2 351 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ROPN1LQ96C74 230 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 MUCL1Q96DR8 90 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TRIM44Q96DX7 344 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SORT1Q99523 831 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 PAIP2Q9BPZ3 127 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC35A5Q9BS91 424 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 INPP5KQ9BT40 448 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TRAF4Q9BUZ4 470 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ADI1Q9BV57 179 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CCDC106Q9BWC9 280 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ROPN1BQ9BZX4 212 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NMUR2Q9GZQ4 415 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF350Q9GZX5 532 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SLCO5A1Q9H2Y9 848 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CENPHQ9H3R5 247 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ROPN1Q9HAT0 212 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 HHATLQ9HCP6 504 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TCF7L1Q9HCS4 588 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 KCNK9Q9NPC2 374 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NGBQ9NPG2 151 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 SERINC1Q9NRX5 453 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 ACER3Q9NUN7 267 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 EXD2Q9NVH0 621 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 WDR45Q9Y484 360 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RNF114Q9Y508 228 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 NIPBLQ6KC79 2804 aaeCLIP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 TMED7-TICAM2A0A0A6YYA0 188 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 GOLGA8QA0A0J9YX86 632 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 GOLGA8OA6NCC3 632 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 CCDC154A6NI56 674 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 OR5H1A6NKK0 313 aa4.11□□□□□ -1.75
GTF3C3-208ENST00000455546 GOLGA8NF8WBI6 632 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms