RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 COL21A1Q96P44 957 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TECTBQ96PL2 329 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLF6Q99612 283 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 LPAR4Q99677 370 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 DCUN1D5Q9BTE7 237 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TPSD1Q9BZJ3 242 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 HRH4Q9H3N8 390 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 C1orf198Q9H425 327 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SPAG4Q9NPE6 437 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PXMP2Q9NR77 195 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 AGPAT4Q9NRZ5 378 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 OLAHQ9NV23 265 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PLEKHJ1Q9NW61 149 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 IFNKQ9P0W0 207 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 GHRLQ9UBU3 117 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC23A1Q9UHI7 598 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZDHHC2Q9UIJ5 367 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PHF11Q9UIL8 331 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CDH22Q9UJ99 828 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 MRTO4Q9UKD2 239 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PITPNC1Q9UKF7 332 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 RAB26Q9ULW5 256 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 STUB1Q9UNE7 303 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 AP4S1Q9Y587 144 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PEX16Q9Y5Y5 336 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 CFAP20Q9Y6A4 193 aaKnown RBP4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 TUBGCP6Q96RT7 1819 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 SPEF2Q9C093 1822 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 ABCA3Q99758 1704 aa4.32□□□□□ -1.72
HMGB3P9-201ENST00000441799 PNPLA7Q6ZV29 1317 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A18PA6NE21 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A16PA6NEW6 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CCDC182A6NF36 153 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 VSTM2BA6NLU5 285 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A9PA6NNJ1 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A5PA8MXJ8 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZNF99A8MXY4 864 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 KLRF2D3W0D1 207 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 M0QXV9 152 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 P2RY10O00398 339 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PEX12O00623 359 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CYB561D2O14569 222 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 MAGEB4O15481 346 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PCDH7O60245 1069 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 SNX3O60493 162 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ENTPD5O75356 428 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 TFP02787 698 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 C8GP07360 202 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A15PP0C7V4 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM90A14PP0C7W9 464 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 EBLN1P0CF75 366 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 MTHFD2P13995 350 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ST6GAL1P15907 406 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 NCK1P16333 377 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PGAM1P18669 254 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 LHCGRP22888 699 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 STOMP27105 288 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CEACAM8P31997 349 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ACVR1BP36896 505 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PMELP40967 661 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 GRIA3P42263 894 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 KIR2DL3P43628 341 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 NPBWR2P48146 333 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 GCLMP48507 274 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CSNK1A1P48729 337 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 EVX1P49640 407 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PPT1P50897 306 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CNN1P51911 297 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CLDN18P56856 261 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 OR4D2P58180 307 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 SELENOTP62341 195 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 RPS6P62753 249 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 IRX4P78413 519 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 MZT1Q08AG7 82 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 SLC10A7Q0GE19 358 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PPP1R8Q12972 351 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ABRAXAS2Q15018 415 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 CYP51A1Q16850 503 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ASTE1Q2TB18 679 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 SOWAHCQ53LP3 525 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZNF766Q5HY98 468 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ANKRD22Q5VYY1 191 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 DHRS7BQ6IAN0 325 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 FAM45BPQ6NSW5 357 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 RHBDD2Q6NTF9 364 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZNF529Q6P280 563 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PRSS55Q6UWB4 352 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ACOT7LQ6ZUV0 252 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 PIWIL4Q7Z3Z4 852 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 TRABD2AQ86V40 505 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 TCTE3Q8IZS6 198 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 TMEM132CQ8N3T6 1108 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 STPG2Q8N412 459 aa4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ZCCHC9Q8N567 271 aaKnown RBP4.31□□□□□ -1.72
HMGB3P9-201ENST00000441799 ATPAF2Q8N5M1 289 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms