RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 LGALS3BPQ08380 585 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 HHATQ5VTY9 493 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 C1orf140Q5VVS0 124 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 NIPAL3Q6P499 406 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 CLIP4Q8N3C7 705 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 ARIH2OSQ8N7S6 290 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC38A5Q8WUX1 472 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 ALKBH3Q96Q83 286 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 VRK1Q99986 396 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 CA10Q9NS85 328 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC6A13Q9NSD5 602 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 ZNF232Q9UNY5 417 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 CUBNO60494 3623 aa13.19□□□□□ -0.3
CSNK1E-208ENST00000431611 A0A096LPI6 279 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 TRPC5OSA6NMA1 111 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 B9A039 149 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC22A3O75751 556 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 AHSA1O95433 338 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ANP32DO95626 131 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 DSTNP60981 165 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 CARTPTQ16568 116 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 TNFAIP8L3Q5GJ75 292 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 CEP85LQ5SZL2 805 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ANKRD16Q6P6B7 361 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 EPHX4Q8IUS5 362 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ANKRD42Q8N9B4 389 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 BCL2L2Q92843 193 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 CHODLQ9H9P2 273 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 KCNS2Q9ULS6 477 aa13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 V9GYY5 206 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-208ENST00000431611 A0A096LPE4 126 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 ARPC4-TTLL3A0A0A6YYG9 625 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 LOC100289279A0A1B0GTE1 492 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 A0A1W2PPZ6 126 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 LOC390937A0A1W2PQ73 354 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 NR5A2O00482 541 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 NPIPB7O75200 414 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 UPK3AO75631 287 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 PDE5AO76074 875 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 OR4A8P0C604 315 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 ZCCHC18P0CG32 403 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 KITP10721 976 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 APEHP13798 732 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 IDO1P14902 403 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 IGFBP5P24593 272 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 TUBA1BP68363 451 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 TUBA4AP68366 448 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 NAAAQ02083 359 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 PDCD4Q53EL6 469 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 ATG16L1Q676U5 607 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 VHLLQ6RSH7 139 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 TUBA1AQ71U36 451 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 LINGO2Q7L985 606 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 SERPINA11Q86U17 422 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 ANKS4BQ8N8V4 417 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 C3orf49Q96BT1 292 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 FOXN4Q96NZ1 517 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 PRR14Q9BWN1 585 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 MOV10Q9HCE1 1003 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 IFT52Q9Y366 437 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 CHST2Q9Y4C5 530 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 PLCE1Q9P212 2302 aa13.17□□□□□ -0.3
CSNK1E-208ENST00000431611 IGHV4-61A0A0C4DH41 118 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 FTCDNL1E5RQL4 147 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms