RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ATF6BQ99941 703 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 GSTK1Q9Y2Q3 226 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 MRPS17Q9Y2R5 130 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 IGKV3-11P04433 115 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 HLA-DPB1P04440 258 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 HK1P19367 917 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 HSD11B2P80365 405 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 TNK1Q13470 666 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 SERTAD2Q14140 314 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 STK11Q15831 433 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 TIGD3Q6B0B8 471 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ARHGAP11AQ6P4F7 1023 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ALPK2Q86TB3 2170 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 PHOSPHO1Q8TCT1 267 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF721Q8TF20 911 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 RELTQ969Z4 430 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 FYTTD1Q96QD9 318 aaKnown RBP13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 NUDT9Q9BW91 350 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 NIPAL2Q9H841 368 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 MKKSQ9NPJ1 570 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 OR6C70A6NIJ9 312 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 EFCAB7A8K855 629 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 J3QLW9 94 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ICOSLGO75144 302 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 UTS2O95399 124 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF19P17023 458 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ACVR1BP36896 505 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 EPHA4P54764 986 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ERVK-25P63136 954 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 SLC3A1Q07837 685 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 P2RY14Q15391 338 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 TP53I3Q53FA7 332 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 DDI2Q5TDH0 399 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 C9orf40Q8IXQ3 194 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 FAM181AQ8N9Y4 354 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 OR5W2Q8NH69 310 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 RAB33BQ9H082 229 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 FSCN3Q9NQT6 498 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 ZC4H2Q9NQZ6 224 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 PRODH2Q9UF12 536 aa13.87□□□□□ -0.19
SCAMP4-202ENST00000409472 COL5A1P20908 1838 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 K7ESF4 209 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 BCAT2O15382 392 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 NDUFB2O95178 105 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 CSF3P09919 207 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 RPL4P36578 427 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ARL4DP49703 201 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 SHBQ15464 509 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 IL20RBQ6UXL0 311 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 LANCL3Q6ZV70 420 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 SPEM1Q8N4L4 309 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 OR10Z1Q8NGY1 313 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 HLA-CQ95604 372 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ADIPOR1Q96A54 375 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF578Q96N58 590 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 TRAF4Q9BUZ4 470 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ERVMER34-1Q9H9K5 563 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ASB6Q9NWX5 421 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 CTSFQ9UBX1 484 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 SERTAD3Q9UJW9 196 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ICAM5Q9UMF0 924 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 ASCC3Q8N3C0 2202 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 FABP12A6NFH5 140 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 FAM171A2A8MVW0 826 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 RGS9O75916 674 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 APEX1P27695 318 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 GPR143P51810 404 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 PSMD4P55036 377 aaKnown RBP13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 OR10A3P58181 314 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 EGR4Q05215 589 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 Q7L0L9 218 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 CMIPQ8IY22 773 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 DTX3Q8N9I9 347 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 PGLYRP3Q96LB9 341 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 CHRNA10Q9GZZ6 450 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.86□□□□□ -0.198e-7■■■□□ 15.6
SCAMP4-202ENST00000409472 TRIM36Q9NQ86 728 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 KLHL21Q9UJP4 597 aa13.86□□□□□ -0.19
SCAMP4-202ENST00000409472 NUDT21O43809 227 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 SELENOFO60613 162 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 SOX30O94993 753 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 IL33O95760 270 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 SHC1P29353 583 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 GRPRP30550 384 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 AFF3P51826 1226 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 EFR3AQ14156 821 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 TOMM34Q15785 309 aaPredicted RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 CNIH2Q6PI25 160 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 ATG4DQ86TL0 474 aaPredicted RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 UBE2J2Q8N2K1 259 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 PCED1AQ9H1Q7 454 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 B3GAT2Q9NPZ5 323 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 NUFIP1Q9UHK0 495 aaKnown RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 ATXN7L1Q9ULK2 861 aaPredicted RBP13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 COPS3Q9UNS2 423 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 IGHV3-20A0A0C4DH32 117 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 DUX1O43812 170 aa13.85□□□□□ -0.19
SCAMP4-202ENST00000409472 HPGDP15428 266 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms