RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 LSM14AQ8ND56 463 aaKnown RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 ATP6V1C2Q8NEY4 427 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 ZMYND19Q96E35 227 aaPredicted RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 NMNAT2Q9BZQ4 307 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 METTL7AQ9H8H3 244 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 ISG20L2Q9H9L3 353 aaKnown RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 BABAM2Q9NXR7 383 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 MED11Q9P086 117 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 PPP4R1LQ9P1A2 415 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 GRHPRQ9UBQ7 328 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 CORINQ9Y5Q5 1042 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 PCNX3Q9H6A9 2034 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 OR6C68A6NDL8 312 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 NPIPB7O75200 414 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 SERPINI2O75830 405 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 WISP1O95388 367 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 TXNDC12O95881 172 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 IGHEP01854 428 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 PRKCAP17252 672 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 MSX1P28360 303 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 GGTLC2Q14390 218 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 EMC4Q5J8M3 183 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 FAM69AQ5T7M9 428 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 C1orf140Q5VVS0 124 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 GHDCQ8N2G8 530 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 OR10G3Q8NGC4 313 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 M1APQ8TC57 530 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 SLC25A36Q96CQ1 311 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 SPACA9Q96E40 222 aaPredicted RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 CNN2Q99439 309 aaKnown RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 PTDSS2Q9BVG9 487 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 C6orf62Q9GZU0 229 aaPredicted RBP17.19■□□□□ 0.34
USP39-202ENST00000409025 WDR70Q9NW82 654 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 ASB6Q9NWX5 421 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 PADI1Q9ULC6 663 aa17.19■□□□□ 0.34
USP39-202ENST00000409025 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 AHSA1O95433 338 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 MT-ND5P03915 603 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 ZNF806P0C7X5 589 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 SPI1P17947 270 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 CELP19835 753 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 IDUAP35475 653 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 DIO1P49895 249 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 IL10RAQ13651 578 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 BICRALQ6AI39 1079 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 OR51L1Q8NGJ5 315 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 TAAR9Q96RI9 348 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 YARS2Q9Y2Z4 477 aaKnown RBP17.18■□□□□ 0.34
USP39-202ENST00000409025 PCDHGB7Q9Y5F8 929 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 KMT2EQ8IZD2 1858 aa17.18■□□□□ 0.34
USP39-202ENST00000409025 GALR2O43603 387 aaPredicted RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 BMP4P12644 408 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 RPS19P39019 145 aaKnown RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 APOBEC1P41238 236 aaKnown RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 CDKN2AP42771 156 aaKnown RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 INSM1Q01101 510 aaPredicted RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 ZNF85Q03923 595 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 GPR50Q13585 617 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 INAQ16352 499 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 GPR139Q6DWJ6 353 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 C22orf42Q6IC83 251 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 C6orf15Q6UXA7 325 aaPredicted RBP17.17■□□□□ 0.34
USP39-202ENST00000409025 GPALPP1Q8IXQ4 340 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 OR5J2Q8NH18 312 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 ZPLD1Q8TCW7 415 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TIMP4Q99727 224 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TM9SF2Q99805 663 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 OCEL1Q9H607 264 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 RERGLQ9H628 205 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TRIM36Q9NQ86 728 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 PISDQ9UG56 409 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 GSTK1Q9Y2Q3 226 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 NOX1Q9Y5S8 564 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 A0A1B0GVG6 124 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TRDV1A0A1B0GX56 115 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TP53I11O14683 189 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 OR2T1O43869 369 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 CBFA2T3O75081 653 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 ITGA10O75578 1167 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 DKK1O94907 266 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 OR2T7P0C7T2 308 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 JMJD7P0C870 316 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 S100A5P33763 92 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 PTGDSP41222 190 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 CAPZA2P47755 286 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 SLC25A1P53007 311 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 SGCBQ16585 318 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 CD200R1LQ6Q8B3 271 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 NDUFAF7Q7L592 441 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 MFSD4AQ8N468 514 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 OR2T27Q8NH04 317 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 DNAJA3Q96EY1 480 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 KCTD7Q96MP8 289 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 TSPAN32Q96QS1 320 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 COQ7Q99807 217 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 EDEM2Q9BV94 578 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 DDA1Q9BW61 102 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 NUAK2Q9H093 628 aa17.17■□□□□ 0.34
USP39-202ENST00000409025 WIF1Q9Y5W5 379 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms