RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ALG12Q9BV10 488 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 PCDHGA6Q9Y5G7 932 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 NPFFR2Q9Y5X5 522 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 POM121BA6NF01 834 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 LYRM1O43325 122 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 BCAS1O75363 584 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 HTR2AP28223 471 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 NR4A2P43354 598 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF91Q05481 1191 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 COL28A1Q2UY09 1125 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 HBMQ6B0K9 141 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 RNF165Q6ZSG1 346 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 H1FNTQ75WM6 255 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 GJC3Q8NFK1 279 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 OR11L1Q8NGX0 322 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 MAFAQ8NHW3 353 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 BRIX1Q8TDN6 353 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 CNOT9Q92600 299 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 SGCZQ96LD1 299 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 SEMA4GQ9NTN9 838 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 NDUFAF4Q9P032 175 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 PSORS1C1Q9UIG5 152 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 YARS2Q9Y2Z4 477 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 AK6Q9Y3D8 172 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 F5P12259 2224 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 HMX2A2RU54 273 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 KDM4EB2RXH2 506 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 LINC01387J3KSC0 135 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF593O00488 134 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GAPDHSO14556 408 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 AKR1C4P17516 323 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GM2AP17900 193 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 AKR1C2P52895 323 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 HYAL1Q12794 435 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM196Q5HYL7 178 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 KDM4DQ6B0I6 523 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CYHR1Q6ZMK1 362 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GDF7Q7Z4P5 450 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 IGFN1Q86VF2 1251 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SERPINA12Q8IW75 414 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 ELMOD2Q8IZ81 293 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CLDN22Q8N7P3 220 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GALNT11Q8NCW6 608 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SIMC1Q8NDZ2 872 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 OR13C2Q8NGS9 318 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GOT1L1Q8NHS2 421 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 GGHQ92820 318 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 FGF14Q92915 247 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 LAT2Q9GZY6 243 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 METTL9Q9H1A3 318 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 BCL2L10Q9HD36 194 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 MAN2C1Q9NTJ4 1040 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 hCG_1809904A0A1W2PP81 198 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 A0A1W2PPE2 198 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 A0A1W2PR64 198 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 A0A1W2PRV1 198 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 DCDC2BA2VCK2 349 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 FAM171A2A8MVW0 826 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 F5H0A9 414 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SURF4O15260 269 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 DCNP07585 359 aaKnown RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 MAOAP21397 527 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CA5AP35218 305 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CCR2P41597 374 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 HTR5AP47898 357 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 DAPP51397 102 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 PPA1Q15181 289 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 LINC00299Q6ZSB3 139 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 UTS2BQ765I0 119 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 MAVSQ7Z434 540 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF695Q8IW36 515 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM151AQ8N4L1 468 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 POGLUT1Q8NBL1 392 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 OR56B1Q8NGI3 324 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SLC6A17Q9H1V8 727 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 MOB1AQ9H8S9 216 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 TREM1Q9NP99 234 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 KLF13Q9Y2Y9 288 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CACNG2Q9Y698 323 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 NOTOA8MTQ0 251 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CEACAM5P06731 702 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 UBBP0CG47 229 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 BDKRB2P30411 391 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SIRPAP78324 504 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 STK11Q15831 433 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CCSMST1Q4G0I0 132 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 FCRL6Q6DN72 434 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SLC25A44Q96H78 314 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SDF2Q99470 211 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 THAP7Q9BT49 309 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 PBDC1Q9BVG4 233 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 CHRNA9Q9UGM1 479 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 DIMT1Q9UNQ2 313 aaKnown RBP4.49□□□□□ -1.69
SCN3A-202ENST00000360093 DOCK3Q8IZD9 2030 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 SPTY2D1-AS1A0A0U1RR47 76 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 C4orf47A7E2U8 309 aa4.49□□□□□ -1.69
SCN3A-202ENST00000360093 J3KTA2 159 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms