RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 AVPP01185 164 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 ADRA2AP08913 450 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 OR12D1P0DN82 309 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 HKR1P10072 659 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 MPGP29372 298 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 S100A3P33764 101 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 THBS4P35443 961 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 CHI3L1P36222 383 aaPredicted RBP13.71□□□□□ -0.21
DDX55-202ENST00000354291 MAGEA8P43361 318 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 KHKP50053 298 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 SESN3P58005 492 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 UBA52P62987 128 aaKnown RBP13.71□□□□□ -0.21
DDX55-202ENST00000354291 BST1Q10588 318 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 SYT14P1Q58G82 188 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 TSPO2Q5TGU0 170 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 SAXO2Q658L1 398 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 ANKRD16Q6P6B7 361 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 OR51F2Q8NH61 342 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 TPK1Q9H3S4 243 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 PNPOQ9NVS9 261 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 PARPBPQ9NWS1 579 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 SLC35A3Q9Y2D2 325 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 PPIAL4AQ9Y536 164 aa13.71□□□□□ -0.21
DDX55-202ENST00000354291 E9PBE3 544 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 PNPP00491 289 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
DDX55-202ENST00000354291 NPR2P20594 1047 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 GPR6P46095 362 aaPredicted RBP13.7□□□□□ -0.22
DDX55-202ENST00000354291 OR2B6P58173 313 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 NAAAQ02083 359 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 LRRC74AQ0VAA2 488 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
DDX55-202ENST00000354291 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 TRIML2Q8N7C3 387 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 ANKRD42Q8N9B4 389 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 RAB8BQ92930 207 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 ROPN1LQ96C74 230 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 CCDC115Q96NT0 180 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 SLC35A5Q9BS91 424 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 UNKLQ9H9P5 680 aaKnown RBP13.7□□□□□ -0.22
DDX55-202ENST00000354291 THAP1Q9NVV9 213 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 MARCOQ9UEW3 520 aaPredicted RBP13.7□□□□□ -0.22
DDX55-202ENST00000354291 BTNL2Q9UIR0 455 aa13.7□□□□□ -0.22
DDX55-202ENST00000354291 TRPC5OSA6NMA1 111 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 WNT9BO14905 357 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 GAAP10253 952 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 SAGP10523 405 aaPredicted RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 CALCRP30988 508 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 APOBEC1P41238 236 aaKnown RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 SLC16A1P53985 500 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 TXNL4AP83876 142 aaKnown RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 HPCAP84074 193 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 C1QTNF12Q5T7M4 302 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 TYW3Q6IPR3 259 aaKnown RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 OR4F15Q8NGB8 312 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 SLC25A43Q8WUT9 341 aaPredicted RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 C22orf15Q8WYQ4 148 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 ARL5BQ96KC2 179 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 ACER3Q9NUN7 267 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 AIG1Q9NVV5 245 aa13.69□□□□□ -0.22
DDX55-202ENST00000354291 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
DDX55-202ENST00000354291 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 CENPVL1A0A0U1RR11 272 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TMEM129A0AVI4 362 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 SDHDO14521 159 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 HDAC3O15379 428 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TFP02787 698 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ALDOCP09972 364 aaKnown RBP13.68□□□□□ -0.22
DDX55-202ENST00000354291 CECR9P0C854 216 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ADRA2CP18825 462 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 COL8A2P25067 703 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 PGM1P36871 562 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 SLC18A1P54219 525 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 UBE2NP61088 152 aaKnown RBP13.68□□□□□ -0.22
DDX55-202ENST00000354291 UFM1P61960 85 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TUBA1BP68363 451 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TUBA4AP68366 448 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 KCNJ10P78508 379 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 HGFACQ04756 655 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 MAPK14Q16539 360 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ATG16L1Q676U5 607 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 FRRS1Q6ZNA5 592 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TUBA1AQ71U36 451 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 CDK20Q8IZL9 346 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ZNF563Q8TA94 476 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 CKAP2Q8WWK9 683 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 ANKRD27Q96NW4 1050 aa13.68□□□□□ -0.22
DDX55-202ENST00000354291 OR52E6Q96RD3 313 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms