RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SELENONQ9NZV5 590 aa19.96■□□□□ 0.79
CCDC9-204ENST00000599398 ARID1AO14497 2285 aa19.96■□□□□ 0.79
CCDC9-204ENST00000599398 A0A1B0GWA3 101 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 CIB4A0PJX0 185 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 NPIPB7O75200 414 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 MFN2O95140 757 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 PLAUP00749 431 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 COX5AP20674 150 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 GTF2E2P29084 291 aaKnown RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 RPS5P46782 204 aaKnown RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 FAPQ12884 760 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 MAPRE2Q15555 327 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 ALG10BQ5I7T1 473 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 ZNF433Q8N7K0 673 aaPredicted RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 LSMEM1Q8N8F7 131 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 OR9K2Q8NGE7 335 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 DNAJA4Q8WW22 397 aaPredicted RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 MUCL1Q96DR8 90 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 CCL19Q99731 98 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 SF3B5Q9BWJ5 86 aaKnown RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 PIF1Q9H611 641 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 CCDC134Q9H6E4 229 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 BEX4Q9NWD9 120 aaPredicted RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 UPB1Q9UBR1 384 aa19.95■□□□□ 0.78
CCDC9-204ENST00000599398 TESQ9UGI8 421 aaKnown RBP19.95■□□□□ 0.78
CCDC9-204ENST00000599398 M0QX08 132 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 RAD51DO75771 328 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 OPN1SWP03999 348 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 MDH1P40925 334 aaKnown RBP19.94■□□□□ 0.78
CCDC9-204ENST00000599398 PCBP3P57721 371 aaKnown RBP19.94■□□□□ 0.78
CCDC9-204ENST00000599398 PPA1Q15181 289 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 NANOGP8Q6NSW7 305 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 C20orf204Q6ZNR8 217 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 NET1Q7Z628 596 aaPredicted RBP19.94■□□□□ 0.78
CCDC9-204ENST00000599398 SLC30A8Q8IWU4 369 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 MFSD8Q8NHS3 518 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 ESRP2Q9H6T0 727 aaKnown RBP19.94■□□□□ 0.78
CCDC9-204ENST00000599398 NANOGQ9H9S0 305 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 C12orf10Q9HB07 376 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 TMEM27Q9HBJ8 222 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 KLHL14Q9P2G3 628 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 CADP27708 2225 aa19.94■□□□□ 0.78
CCDC9-204ENST00000599398 LOC100653049A0A140TA62 436 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 MRASO14807 208 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 CLOCKO15516 846 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 KRT34O76011 436 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 PNMTP11086 282 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 EGR4Q05215 589 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 REP15Q6BDI9 236 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 ULK3Q6PHR2 472 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 C6orf89Q6UWU4 347 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 AAED1Q7RTV5 226 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 RANBP3LQ86VV4 465 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-204ENST00000599398 SNX32Q86XE0 403 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 SLC26A7Q8TE54 656 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 PIGTQ969N2 578 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 LRRC58Q96CX6 371 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 KTI12Q96EK9 354 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-204ENST00000599398 SH3GL1Q99961 368 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 MALT1Q9UDY8 824 aa19.93■□□□□ 0.78
CCDC9-204ENST00000599398 RAI1Q7Z5J4 1906 aaPredicted RBP19.93■□□□□ 0.78
CCDC9-204ENST00000599398 BBIP1A8MTZ0 92 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 SMPD2O60906 423 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 VAMP5O95183 116 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 CD3EP07766 207 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 PCGF2P35227 344 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 OR1Q1Q15612 314 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 RABL3Q5HYI8 236 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 COQ5Q5HYK3 327 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 TIMM23BQ5SRD1 257 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 INTS11Q5TA45 600 aaKnown RBP19.92■□□□□ 0.78
CCDC9-204ENST00000599398 C9orf135Q5VTT2 229 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 FAM91A1Q658Y4 838 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 PATL1Q86TB9 770 aaKnown RBP19.92■□□□□ 0.78
CCDC9-204ENST00000599398 TGIF2LYQ8IUE0 185 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 P3H2Q8IVL5 708 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 SLC38A4Q969I6 547 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 TMEM45BQ96B21 275 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 SLC47A1Q96FL8 570 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 ZNF385AQ96PM9 386 aaKnown RBP19.92■□□□□ 0.78
CCDC9-204ENST00000599398 ECSITQ9BQ95 431 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 WFDC6Q9BQY6 131 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 PTDSS2Q9BVG9 487 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 EVA1AQ9H8M9 152 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 SLC7A10Q9NS82 523 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 TAS2R16Q9NYV7 291 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 RNF115Q9Y4L5 304 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 CAPN7Q9Y6W3 813 aa19.92■□□□□ 0.78
CCDC9-204ENST00000599398 OR5H1A6NKK0 313 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 FTCDNL1E5RQL4 147 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 M0R3H8 397 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 P2RY4P51582 365 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 FOXG1P55316 489 aaPredicted RBP19.91■□□□□ 0.78
CCDC9-204ENST00000599398 DUSP7Q16829 419 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 NCMAPQ5T1S8 102 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 TSPO2Q5TGU0 170 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 C5orf46Q6UWT4 87 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 P2RY8Q86VZ1 359 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 ZIC4Q8N9L1 334 aa19.91■□□□□ 0.78
CCDC9-204ENST00000599398 OR52N5Q8NH56 324 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms