RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C4orf36Q96KX1 117 aa16.52■□□□□ 0.24
SMPD3-211ENST00000568373 CD8B2A6NJW9 211 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 C17orf51A8MQB3 221 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 CASKO14936 926 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 GMFGO60234 142 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 HEXBP07686 556 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 CD8BP10966 210 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 ITPKBP27987 946 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 CAPZA2P47755 286 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 DCDP81605 110 aaKnown RBP16.52■□□□□ 0.23
SMPD3-211ENST00000568373 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.23
SMPD3-211ENST00000568373 TMEM91Q6ZNR0 172 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 GALNT6Q8NCL4 622 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 OR51L1Q8NGJ5 315 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 AP3S1Q92572 193 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 KTI12Q96EK9 354 aaPredicted RBP16.52■□□□□ 0.23
SMPD3-211ENST00000568373 DEPDC7Q96QD5 511 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 CNN2Q99439 309 aaKnown RBP16.52■□□□□ 0.23
SMPD3-211ENST00000568373 SDHCQ99643 169 aaPredicted RBP16.52■□□□□ 0.23
SMPD3-211ENST00000568373 CCDC32Q9BV29 185 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 NMNAT2Q9BZQ4 307 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 SEMA4CQ9C0C4 833 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 NOX1Q9Y5S8 564 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 V9GYH0 126 aa16.52■□□□□ 0.23
SMPD3-211ENST00000568373 SMIM30A4D0T7 59 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 OR6C68A6NDL8 312 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 FADS1O60427 444 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 RGS9O75916 674 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-211ENST00000568373 CD53P19397 219 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 EVI2BP34910 448 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 TAS2R43P59537 309 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 LTBQ06643 244 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 PON3Q15166 354 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 TOMM34Q15785 309 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-211ENST00000568373 VASH1Q7L8A9 365 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-211ENST00000568373 MAML2Q8IZL2 1156 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-211ENST00000568373 LRRC75AQ8NAA5 344 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 APCDD1LQ8NCL9 501 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 TP53INP1Q96A56 240 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 KCNN2Q9H2S1 579 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 SP140LQ9H930 580 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 TRAPPC4Q9Y296 219 aa16.51■□□□□ 0.23
SMPD3-211ENST00000568373 OR6C70A6NIJ9 312 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 E9PI62 339 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 J3QLW9 94 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 PLPP2O43688 288 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 CDC40O60508 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 TFP02787 698 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 CD14P08571 375 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 APEHP13798 732 aaKnown RBP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF19P17023 458 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 PGCP20142 388 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 UQCRC1P31930 480 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 DIO1P49895 249 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 OR12D2P58182 307 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ALG10Q5BKT4 473 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 SLC35D3Q5M8T2 416 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 SSX6Q7RTT6 188 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 FAM122BQ7Z309 247 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 POC5Q8NA72 575 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 DRAXINQ8NBI3 349 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 NFAM1Q8NET5 270 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ZPLD1Q8TCW7 415 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 MESP1Q9BRJ9 268 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ABCB9Q9NP78 766 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 SLC6A5Q9Y345 797 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 TEX13CA0A0J9YWL9 993 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 SHISA3A0PJX4 238 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ALOX12BO75342 701 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 NUDT14O95848 222 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 OR2T7P0C7T2 308 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 SPI1P17947 270 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 CXCR1P25024 350 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 NRG3P56975 720 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 DDI2Q5TDH0 399 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ZNF385CQ66K41 422 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-211ENST00000568373 ARL9Q6T311 187 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 OVCH1Q7RTY7 1134 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 GHDCQ8N2G8 530 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 RFLNBQ8N5W9 214 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 OR2I1PQ8NGU4 316 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 OR2T27Q8NH04 317 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 Q96M85 177 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 LPAR4Q99677 370 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 MIXL1Q9H2W2 232 aa16.5■□□□□ 0.23
SMPD3-211ENST00000568373 FRYLO94915 3013 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 IMPA2O14732 288 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 SCO2O43819 266 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ONECUT2O95948 504 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 HNRNPCP07910 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMPD3-211ENST00000568373 CAV3P56539 151 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 IL10RAQ13651 578 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 CBFBQ13951 182 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 PPP1R3BQ86XI6 285 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 ZNRF4Q8WWF5 429 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 METTL21AQ8WXB1 218 aa16.49■□□□□ 0.23
SMPD3-211ENST00000568373 TAAR8Q969N4 342 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms