RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 MAN2B1O00754 1011 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SELENOFO60613 162 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 FKTNO75072 461 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 AK1P00568 194 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 WNT1P04628 370 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SFTPBP07988 381 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 PVRP15151 417 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ATF1P18846 271 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 DCTDP32321 178 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SEC61A1P61619 476 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 CST6Q15828 149 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 TRMT12Q53H54 448 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 TMEM64Q6YI46 380 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 TMEM150AQ86TG1 271 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 LIX1LQ8IVB5 337 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 OR51D1Q8NGF3 324 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 OR52B4Q8NGK2 314 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 PAQR8Q8TEZ7 354 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 RADILQ96JH8 1075 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 HCAR1Q9BXC0 346 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SEC61A2Q9H9S3 476 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 LSM2Q9Y333 95 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 HRH3Q9Y5N1 445 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF638Q14966 1978 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF736B4DX44 427 aaPredicted RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 CTSLP07711 333 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 CPMP14384 443 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 CXADRP78310 365 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 C19orf57Q0VDD7 668 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ALG10Q5BKT4 473 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 KCTD18Q6PI47 426 aaPredicted RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 PRSS42Q7Z5A4 293 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SLC35F3Q8IY50 421 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 OR11H7Q8NGC8 314 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF417Q8TAU3 575 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 MS4A6EQ96DS6 147 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 C19orf43Q9BQ61 176 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 CMC2Q9NRP2 79 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ATXN7L1Q9ULK2 861 aaPredicted RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 PLEKHM1Q9Y4G2 1056 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SERTM1A2A2V5 107 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 GABARAPH6UMI1 98 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 HLA-AP01891 365 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 EPXP11678 715 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF20P17024 532 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 EIF5AP63241 154 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 RIPPLY1Q0D2K3 151 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 STK11Q15831 433 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF542PQ5EBM4 170 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ZNF776Q68DI1 518 aaPredicted RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 NUP54Q7Z3B4 507 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 TSEN54Q7Z6J9 526 aaKnown RBP9.74□□□□□ -0.85
USB1-212ENST00000566082 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SCARB1Q8WTV0 552 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 PEX11GQ96HA9 241 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 CAPNS2Q96L46 248 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 ORAI3Q9BRQ5 295 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 IL20Q9NYY1 176 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 SLC6A5Q9Y345 797 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 BRCA2P51587 3418 aa9.74□□□□□ -0.85
USB1-212ENST00000566082 H3BUI4 141 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 KAT7O95251 611 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 F3P13726 295 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 APEHP13798 732 aaKnown RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 GDI1P31150 447 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 LUMP51884 338 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 C21orf58P58505 322 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 RPS21P63220 83 aaKnown RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 CDKN3Q16667 212 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 NDUFAF7Q7L592 441 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 C17orf47Q8NEP4 570 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 OR7G2Q8NG99 324 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 OR52R1Q8NGF1 315 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 OR51S1Q8NGJ8 323 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 FAM46BQ96A09 425 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SLC6A18Q96N87 628 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 WFDC6Q9BQY6 131 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 ULBP3Q9BZM4 244 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 PITHD1Q9GZP4 211 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 DLL4Q9NR61 685 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 EPHA6Q9UF33 1036 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 GPN3Q9UHW5 284 aaPredicted RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 NPC1O15118 1278 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 FADS1O60427 444 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 GRM7Q14831 915 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 ULK3Q6PHR2 472 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 DGLUCYQ7Z3D6 616 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 DCUN1D4Q92564 292 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 SDF2Q99470 211 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 ALG12Q9BV10 488 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 BCL2L14Q9BZR8 327 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 TESQ9UGI8 421 aaKnown RBP9.73□□□□□ -0.85
USB1-212ENST00000566082 WDR81Q562E7 1941 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 B4DGG1 531 aa9.73□□□□□ -0.85
USB1-212ENST00000566082 ZNF878C9JN71 531 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms