RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 MUC13Q9H3R2 512 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 DCAF13Q9NV06 445 aaKnown RBP13.37□□□□□ -0.27
RNF4-210ENST00000508235 ELOVL5Q9NYP7 299 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 SLC7A7Q9UM01 511 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 CLEC4AQ9UMR7 237 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 SNX13Q9Y5W8 968 aa13.37□□□□□ -0.27
RNF4-210ENST00000508235 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 AQP7P3A6NL99 342 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 HNRNPRO43390 633 aaKnown RBP13.36□□□□□ -0.27
RNF4-210ENST00000508235 UBOX5O94941 541 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 VAMP5O95183 116 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 CGAP01215 116 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 TNFRSF1BP20333 461 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 SLC16A1P53985 500 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 SORDQ00796 357 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 ST3GAL3Q11203 375 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 DNAL1Q4LDG9 190 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 TMEM225Q6GV28 225 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 VTCN1Q7Z7D3 282 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 FAM156AQ8NDB6 213 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
RNF4-210ENST00000508235 SLC41A3Q96GZ6 507 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 HSH2DQ96JZ2 352 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 PRRC1Q96M27 445 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 NSMCE2Q96MF7 247 aa13.36□□□□□ -0.27
RNF4-210ENST00000508235 SF3B5Q9BWJ5 86 aaKnown RBP13.36□□□□□ -0.27
RNF4-210ENST00000508235 NPDC1Q9NQX5 325 aaPredicted RBP13.36□□□□□ -0.27
RNF4-210ENST00000508235 C6orf203Q9P0P8 240 aaPredicted RBP13.36□□□□□ -0.27
RNF4-210ENST00000508235 LRRK2Q5S007 2527 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 IGKV1D-42A0A075B6H8 117 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 AKR7A3O95154 331 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 STAMBPO95630 424 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 IGFBP2P18065 325 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 RBM34P42696 430 aaKnown RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 GDF7Q7Z4P5 450 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 ZNF610Q8N9Z0 462 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 POP5Q969H6 163 aaKnown RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 SLC25A36Q96CQ1 311 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 PTDSS2Q9BVG9 487 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 ASPNQ9BXN1 380 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 GALNT8Q9NY28 637 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 TAS2R1Q9NYW7 299 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 RIMS3Q9UJD0 308 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 NOSIPQ9Y314 301 aaKnown RBP13.35□□□□□ -0.27
RNF4-210ENST00000508235 CORINQ9Y5Q5 1042 aa13.35□□□□□ -0.27
RNF4-210ENST00000508235 ZNF716A6NP11 495 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 FTCDNL1E5RQL4 147 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 ARPC2O15144 300 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 GYG2O15488 501 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 FZD7O75084 574 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 COL8A1P27658 744 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 RASSF2P50749 326 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 PIN1Q13526 163 aaPredicted RBP13.34□□□□□ -0.27
RNF4-210ENST00000508235 MTX3Q5HYI7 312 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 CCDC103Q8IW40 242 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 TMEM99Q8N816 258 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 TAAR8Q969N4 342 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 ZNF300Q96RE9 604 aaPredicted RBP13.34□□□□□ -0.27
RNF4-210ENST00000508235 ZNF426Q9BUY5 554 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 FNDC11Q9BVV2 318 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 AMBRA1Q9C0C7 1298 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 C12orf49Q9H741 205 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 ACTR3BQ9P1U1 418 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 ING1Q9UK53 422 aaPredicted RBP13.34□□□□□ -0.27
RNF4-210ENST00000508235 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
RNF4-210ENST00000508235 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
RNF4-210ENST00000508235 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 MRPL33O75394 65 aaKnown RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 ATP5HO75947 161 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 LYPD3O95274 346 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 CNOT4O95628 575 aaKnown RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 THY1P04216 161 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 POU2F1P14859 743 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 ITGA2P17301 1181 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 KLK2P20151 261 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 CD79BP40259 229 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 SLC17A1Q14916 467 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 ZNF474Q6S9Z5 364 aaPredicted RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 H1FNTQ75WM6 255 aaPredicted RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 NUFIP2Q7Z417 695 aaKnown RBP13.33□□□□□ -0.28
RNF4-210ENST00000508235 GPAT4Q86UL3 456 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
RNF4-210ENST00000508235 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms