RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 FOXJ3Q9UPW0 622 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 NUP210LQ5VU65 1888 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 PTPRJQ12913 1337 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 A8MXK9 166 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 PRR23D1E9PI22 279 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CTAG2O75638 210 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 OR4F21O95013 312 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 ECDO95905 644 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 TRIM49P0CI25 452 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 TRIM49CP0CI26 452 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 PRR23D2P0DMB1 279 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 F8A1P23610 371 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 UCP1P25874 307 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CA7P43166 264 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 ATP4BP51164 291 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 HILS1P60008 231 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 IRX1P78414 480 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 BNIP1Q12981 228 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 ACSF3Q4G176 576 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 OTUD3Q5T2D3 398 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 WDR25Q64LD2 544 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 PNCKQ6P2M8 343 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 APOOLQ6UXV4 268 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 RNF130Q86XS8 419 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CENPLQ8N0S6 344 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 GCNT2Q8N0V5 402 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CCDC112Q8NEF3 446 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 OR2T34Q8NGX1 318 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 SHC3Q92529 594 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 ART4Q93070 314 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 RAB7BQ96AH8 199 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 HPDLQ96IR7 371 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 POM121L2Q96KW2 1035 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 AGAP3Q96P47 875 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CPXM1Q96SM3 734 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 CABLES2Q9BTV7 478 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 WRAP53Q9BUR4 548 aaKnown RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 NUDT9Q9BW91 350 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 GSDMCQ9BYG8 508 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 LRRN3Q9H3W5 708 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 FAM114A2Q9NRY5 505 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 C1orf123Q9NWV4 160 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 GPR83Q9NYM4 423 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 UXTQ9UBK9 157 aaPredicted RBP3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 ASIC3Q9UHC3 531 aa3.93□□□□□ -1.78
SSX2IP-208ENST00000490476 PLXNB1O43157 2135 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 MPDZO75970 2070 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 A0A0A6YYD4 124 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 A0A0U1RQS6 177 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ARGFXA6NJG6 315 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 E9PMD0 336 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 K7EQG2 157 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 SGK494L7N484 410 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 MAPK13O15264 365 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 MSH4O15457 936 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 GPAA1O43292 621 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 CACNG3O60359 315 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 NDUFA7O95182 113 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 KRT6BP04259 564 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 CCDC159P0C7I6 412 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 SLC35G4P0C7Q5 338 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 HSD17B1P14061 328 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 DPP4P27487 766 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 SAA4P35542 130 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 KRT6CP48668 564 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 RIDAP52758 137 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 METAP1P53582 386 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 NAPAP54920 295 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 RPS14P62263 151 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 SIX1Q15475 284 aaPredicted RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ANKDD1AQ495B1 522 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 TMEM41BQ5BJD5 291 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 DMKNQ6E0U4 476 aaPredicted RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ZSCAN25Q6NSZ9 544 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 PAQR9Q6ZVX9 377 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 TSEN54Q7Z6J9 526 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 CATSPER3Q86XQ3 398 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 C3orf56Q8N813 242 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 FDCSPQ8NFU4 85 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 OR10T2Q8NGX3 314 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 MIPOL1Q8TD10 442 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 PINX1Q96BK5 328 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNF597Q96LX8 424 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 LINC00479Q96M42 142 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 VPS35Q96QK1 796 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 XPO6Q96QU8 1125 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 HSD17B14Q9BPX1 270 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 MCRIP2Q9BUT9 160 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 RBM24Q9BX46 236 aaKnown RBP3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ING2Q9H160 280 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 ZDHHC18Q9NUE0 388 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 RDH8Q9NYR8 311 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 GHRLQ9UBU3 117 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 RARRES3Q9UL19 164 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 EMCNQ9ULC0 261 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 CPQQ9Y646 472 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 DOCK10Q96BY6 2186 aa3.92□□□□□ -1.78
SSX2IP-208ENST00000490476 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
SSX2IP-208ENST00000490476 TTC26A0AVF1 554 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms