RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 OR6C65A6NJZ3 312 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 AQP7P3A6NL99 342 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF716A6NP11 495 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF814B7Z6K7 855 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF587BE7ETH6 402 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 HS3ST1O14792 307 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 AIM2O14862 343 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 KLF4O43474 513 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 OR2T1O43869 369 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ADAM11O75078 769 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 WNT11O96014 354 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 IMPDH2P12268 514 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 BMP2P12643 396 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 CDH2P19022 906 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ACAA2P42765 397 aaKnown RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 RPS5P46782 204 aaKnown RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 CDH11P55287 796 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 MFSD13AQ14CX5 517 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 MAPK11Q15759 364 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 TRMT5Q32P41 509 aaKnown RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ALG10BQ5I7T1 473 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 Q5PR19 223 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 C9orf135Q5VTT2 229 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ULK3Q6PHR2 472 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 DHRS4L2Q6PKH6 230 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM108Q6UXF1 575 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 PATL1Q86TB9 770 aaKnown RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 MSRB3Q8IXL7 192 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 PIAS4Q8N2W9 510 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 DPP10Q8N608 796 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM99Q8N816 258 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 POMGNT2Q8NAT1 580 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 OR52N5Q8NH56 324 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 RASSF5Q8WWW0 418 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 FBXW5Q969U6 566 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 C3orf49Q96BT1 292 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 SLC47A1Q96FL8 570 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ANKRD27Q96NW4 1050 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 PIP5K1AQ99755 562 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 SF3B5Q9BWJ5 86 aaKnown RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ASPNQ9BXN1 380 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 GID8Q9NWU2 228 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 MAGED1Q9Y5V3 778 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-232ENST00000489053 MPDZO75970 2070 aa8.07□□□□□ -1.12
HDAC6-232ENST00000489053 TRAV36DV7A0A075B6V5 113 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 A0A1B0GWA3 101 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 OR5H1A6NKK0 313 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 BBIP1A8MTZ0 92 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 M0R1B8 84 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 SIAH2O43255 324 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 TMCC2O75069 709 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 OR6A2O95222 327 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 IFNA14P01570 189 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF43P17038 809 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 GPX2P18283 190 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 IGHV1-2P23083 117 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF83P51522 516 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 RIPPLY3P57055 190 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 UBE2NP61088 152 aaKnown RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 RPS4XP62701 263 aaKnown RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 H3F3AP84243 136 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 PLAURQ03405 335 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 BSPH1Q075Z2 132 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 FOXD4Q12950 439 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 RUNDC3AQ59EK9 446 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 FAM91A1Q658Y4 838 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 HMBOX1Q6NT76 420 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 SLC22A25Q6T423 547 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 NET1Q7Z628 596 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ATG4DQ86TL0 474 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 LRRC75A-AS1Q8N1F1 130 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF433Q8N7K0 673 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ZNF611Q8N823 705 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 SMYD1Q8NB12 490 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 MFSD8Q8NHS3 518 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 PROX1Q92786 737 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM45BQ96B21 275 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 TRMT61AQ96FX7 289 aaKnown RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 RADILQ96JH8 1075 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 CPPED1Q9BRF8 314 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 SLCO5A1Q9H2Y9 848 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 PIF1Q9H611 641 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 C12orf10Q9HB07 376 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 ING1Q9UK53 422 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-232ENST00000489053 MGAT4BQ9UQ53 548 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 LAMP3Q9UQV4 416 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 AMDHD2Q9Y303 409 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 FLVCR1Q9Y5Y0 555 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 CAPN7Q9Y6W3 813 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 C2CD3Q4AC94 2353 aa8.06□□□□□ -1.12
HDAC6-232ENST00000489053 A0A1W2PPR1 153 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 FAM171A2A8MVW0 826 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 ABCD4O14678 606 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 MRASO14807 208 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 RAMP1O60894 148 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 SLC43A1O75387 559 aa8.05□□□□□ -1.12
HDAC6-232ENST00000489053 OPN1SWP03999 348 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms