RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RBM18Q96H35 190 aaKnown RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 AICDAQ9GZX7 198 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 ABRACLQ9P1F3 81 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 SERGEFQ9UGK8 458 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 OR6A2O95222 327 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 BIKQ13323 160 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 CLLU1Q5K131 121 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 ZAR1Q86SH2 424 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 PAQR7Q86WK9 346 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 ZNF619Q8N2I2 560 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 TOR1AIP2Q8NFQ8 470 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 SOSTQ9BQB4 213 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 B3GNT4Q9C0J1 378 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 KCNK15Q9H427 330 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 ADGRL4Q9HBW9 690 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 NRIP3Q9NQ35 241 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 ZMIZ1Q9ULJ6 1067 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 INSL6Q9Y581 213 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 PLXNA3P51805 1871 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 PLGP00747 810 aaPredicted RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 TMIGD3P0DMS9 266 aaPredicted RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 RRASP10301 218 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 VAMP1P23763 118 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 TMEM64Q6YI46 380 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 PRSS58Q8IYP2 241 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 OR4N2Q8NGD1 307 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 CCL4L1Q8NHW4 92 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 SFXN5Q8TD22 340 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 SLC25A36Q96CQ1 311 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 MRPL48Q96GC5 212 aaKnown RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 ADAM29Q9UKF5 820 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.53
VPS52-218ENST00000482399 NPFFR2Q9Y5X5 522 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.53
VPS52-218ENST00000482399 LINC00862A6NCI5 91 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 C4orf47A7E2U8 309 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 SHOXO15266 292 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 SEC14L5O43304 696 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 NFATC1O95644 943 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 ITGB8P26012 769 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 GRM7Q14831 915 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 TRAM1Q15629 374 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 CHST4Q8NCG5 386 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 OR51D1Q8NGF3 324 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 POMT2Q9UKY4 750 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.54
VPS52-218ENST00000482399 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 PLPP2O43688 288 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 NDUFS1P28331 727 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 CCKBRP32239 447 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 THBS2P35442 1172 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ZP1P60852 638 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 CDK5R1Q15078 307 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ZNF77Q15935 545 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SPRED2Q7Z698 418 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 LNX2Q8N448 690 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 WFIKKN2Q8TEU8 576 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 Q96M85 177 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ATG5Q9H1Y0 275 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 C11orf49Q9H6J7 331 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SIGLEC7Q9Y286 467 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 HELZP42694 1942 aaKnown RBP11.7□□□□□ -0.54
VPS52-218ENST00000482399 CCSO14618 274 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 KHNYNO15037 678 aaKnown RBP11.7□□□□□ -0.54
VPS52-218ENST00000482399 SPINT1O43278 529 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SULT1A3P0DMM9 295 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SULT1A4P0DMN0 295 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ZNF10P21506 573 aaPredicted RBP11.7□□□□□ -0.54
VPS52-218ENST00000482399 S100A11P31949 105 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 GRK6P43250 576 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 MMP15P51511 669 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SNRPNP63162 240 aaKnown RBP11.7□□□□□ -0.54
VPS52-218ENST00000482399 SKP1P63208 163 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 NOGQ13253 232 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 SLC35D2Q76EJ3 337 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 KCTD9Q7L273 389 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 FRMD1Q8N878 549 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ZNF563Q8TA94 476 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 ELF4Q99607 663 aaPredicted RBP11.7□□□□□ -0.54
VPS52-218ENST00000482399 NTMQ9P121 344 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 H0Y8X5 98 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 NDUFB2O95178 105 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 CSTAP01040 98 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 LPLP06858 475 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 CXCL2P19875 107 aa11.7□□□□□ -0.54
VPS52-218ENST00000482399 TRA2BP62995 288 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms