RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GDE1Q9NZC3 331 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 MTFP1Q9UDX5 166 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-206ENST00000476391 CA14Q9ULX7 337 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 ASF1AQ9Y294 204 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 DOCK6Q96HP0 2047 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 COL4A5P29400 1685 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SULT2B1O00204 365 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 KLHL18O94889 574 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 EPPINO95925 133 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 APBA3O96018 575 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 HOXB5P09067 269 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SFTA3P0C7M3 94 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 HOXA5P20719 270 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ACKR3P25106 362 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PYCR1P32322 319 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ADH7P40394 386 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CAV2P51636 162 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 OR12D2P58182 307 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 TAS2R20P59543 309 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CD81P60033 236 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF234Q14588 700 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 BEX5Q5H9J7 111 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PRPF38BQ5VTL8 546 aaKnown RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PWWP2BQ6NUJ5 590 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 KISS1RQ969F8 398 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SMIM19Q96E16 107 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SFXN1Q9H9B4 322 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 RHOFQ9HBH0 211 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 TP53TG5Q9Y2B4 290 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PCDHGA1Q9Y5H4 931 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PCNTO95613 3336 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 URADA6NGE7 173 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 TCAPO15273 167 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 OGG1O15527 345 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF821O75541 412 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CALCBP10092 127 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 COX5BP10606 129 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CDK2P24941 298 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 S100A2P29034 98 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SKP2Q13309 424 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CCINQ13939 588 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 SYPL1Q16563 259 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 TMPRSS11FQ6ZWK6 438 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 LRRTM1Q86UE6 522 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 C1QL4Q86Z23 238 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 INO80EQ8NBZ0 244 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 EXO5Q9H790 373 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 MEPEQ9NQ76 525 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 UPB1Q9UBR1 384 aa12.74□□□□□ -0.37
HDAC1-206ENST00000476391 ZFP37Q9Y6Q3 630 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-206ENST00000476391 IDSB3KWA1 339 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 M0QZQ0 153 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MFNGO00587 321 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 KLF4O43474 513 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 SRMP19623 302 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 DDTP30046 118 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 CDX1P47902 265 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 CSNK1DP48730 415 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 FOXK2Q01167 660 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF85Q03923 595 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 TAF13Q15543 124 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF311Q5JNZ3 666 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 C10orf120Q5SQS8 335 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 TCEAL6Q6IPX3 200 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 DPPA4Q7L190 304 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 KLHDC9Q8NEP7 349 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MIB2Q96AX9 1013 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ZCCHC2Q9C0B9 1178 aaKnown RBP12.73□□□□□ -0.37
HDAC1-206ENST00000476391 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 PARPBPQ9NWS1 579 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 ANKRD10Q9NXR5 420 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 H3BNC9 293 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 H7BY64 318 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 NPC1O15118 1278 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 CTNSO60931 367 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 B3GAT3O94766 335 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 CD1AP06126 327 aa12.73□□□□□ -0.37
HDAC1-206ENST00000476391 RHOCP08134 193 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms