RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 LNX2Q8N448 690 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 OR4C16Q8NGL9 310 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 OTUB2Q96DC9 234 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 MS4A4EQ96PG1 132 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
NPHP4-207ENST00000470763 IDSB3KWA1 339 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ANXA11P50995 505 aaKnown RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 MANEAQ5SRI9 462 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF546Q86UE3 836 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 MNTQ99583 582 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ZDHHC5Q9C0B5 715 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 C6orf106Q9H6K1 298 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 SYNPO2LQ9H987 977 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 OR5V1Q9UGF6 321 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 OR6C68A6NDL8 312 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 RIIAD1A6NNX1 92 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 MAN2B1O00754 1011 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 SNAPC5O75971 98 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 CSF2RAP15509 400 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 RPA2P15927 270 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 TIMP2P16035 220 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 SIRPAP78324 504 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ELAVL2Q12926 359 aaKnown RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 PLA2G7Q13093 441 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 SWI5Q1ZZU3 235 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF658BQ4V348 819 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-207ENST00000470763 OR4C11Q6IEV9 310 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 LCTLQ6UWM7 567 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 NUP43Q8NFH3 380 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 OR9A2Q8NGT5 310 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 DUSP19Q8WTR2 217 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 VWCEQ96DN2 955 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 RHBGQ9H310 441 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 KLHL31Q9H511 634 aa12.66□□□□□ -0.38
NPHP4-207ENST00000470763 ACOT7O00154 380 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 ADCYAP1P18509 176 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 TAS2R20P59543 309 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 MLC1Q15049 377 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 NDUFAF6Q330K2 333 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 FAM46CQ5VWP2 391 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 PWWP2BQ6NUJ5 590 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 SETD7Q8WTS6 366 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 SNX33Q8WV41 574 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 NR4A3Q92570 626 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 C10orf90Q96M02 699 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 H3BSH0 61 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF749O43361 778 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 GP1BAP07359 652 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 UBBP0CG47 229 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 UBCP0CG48 685 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 RPS27AP62979 156 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 UBA52P62987 128 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 OR1S2Q8NGQ3 325 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 CYB5D2Q8WUJ1 264 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 UTP23Q9BRU9 249 aaKnown RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 CRB3Q9BUF7 120 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 AICDAQ9GZX7 198 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 IL21RQ9HBE5 538 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 ATG4BQ9Y4P1 393 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 PCYT1BQ9Y5K3 369 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-207ENST00000470763 TRANK1O15050 2925 aa12.65□□□□□ -0.38
NPHP4-207ENST00000470763 SGCEO43556 437 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 LILRB5O75023 590 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 POP7O75817 140 aaKnown RBP12.65□□□□□ -0.39
NPHP4-207ENST00000470763 EIF3GO75821 320 aaKnown RBP eCLIP12.65□□□□□ -0.39
NPHP4-207ENST00000470763 MGMTP16455 207 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 KRT33BQ14525 404 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 HYAL4Q2M3T9 481 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 MOB3CQ70IA8 216 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 OR2W3Q7Z3T1 314 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF547Q8IVP9 402 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF461Q8TAF7 563 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 ING5Q8WYH8 240 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 ASF1BQ9NVP2 202 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 USP36Q9P275 1121 aaKnown RBP12.65□□□□□ -0.39
NPHP4-207ENST00000470763 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF443Q9Y2A4 671 aaPredicted RBP12.65□□□□□ -0.39
NPHP4-207ENST00000470763 KIAA1549LQ6ZVL6 1849 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 TMEM200CA6NKL6 621 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 C4orf51C9J302 202 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 OGG1O15527 345 aa12.64□□□□□ -0.39
NPHP4-207ENST00000470763 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
NPHP4-207ENST00000470763 AKR7A3O95154 331 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms