RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	VPS13C	Q709C8	3753 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507		A0A1B0GWA3	101 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507		A8MVM7	634 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	C16orf97	H3BN30	126 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	SMAD9	O15198	467 aa	Known RBP	11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF208	O43345	1280 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	GMNN	O75496	209 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	AHSA1	O95433	338 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	FAM107A	O95990	144 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	FPR1	P21462	350 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	HTR2A	P28223	471 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	AGTR1	P30556	359 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	GZMM	P51124	257 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC35A1	P78382	337 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	CEACAM7	Q14002	265 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	OR1Q1	Q15612	314 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	DUSP7	Q16829	419 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	DEF8	Q6ZN54	512 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	PIGW	Q7Z7B1	504 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	CALHM3	Q86XJ0	350 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	LRRC75A-AS1	Q8N1F1	130 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC43A2	Q8N370	569 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	C10orf53	Q8N6V4	93 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ANKS4B	Q8N8V4	417 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF610	Q8N9Z0	462 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	FAM162A	Q96A26	154 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC25A36	Q96CQ1	311 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF583	Q96ND8	569 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	NAA11	Q9BSU3	229 aa	Predicted RBP	11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	KLHL4	Q9C0H6	718 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ADAM19	Q9H013	955 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ALG2	Q9H553	416 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	PLSCR4	Q9NRQ2	329 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	GMPR2	Q9P2T1	348 aa	Known RBP	11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	TAGLN3	Q9UI15	199 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	ADAM21	Q9UKJ8	722 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	SH3GLB1	Q9Y371	365 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	DSCAM	O60469	2012 aa		11.3	□□□□□ -0.6
FDPS-204	ENST00000461507	NME4	O00746	187 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	NDUFAB1	O14561	156 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	SHOX2	O60902	331 aa	Predicted RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	PMS2P2	O95744	297 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF682	O95780	498 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	GPI	P06744	558 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	PPP3CB	P16298	524 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	TCN1	P20061	433 aa	Predicted RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	TNFRSF1B	P20333	461 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	CD247	P20963	164 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	CBL	P22681	906 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	RPS5	P46782	204 aa	Known RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	CLK1	P49759	484 aa	Known RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	GSK3B	P49841	420 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	C1orf140	Q5VVS0	124 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ALKBH2	Q6NS38	261 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ATG4D	Q86TL0	474 aa	Predicted RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	GPAT4	Q86UL3	456 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	CARM1	Q86X55	608 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	P3H2	Q8IVL5	708 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC15A3	Q8IY34	581 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF100	Q8IYN0	542 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	RNF148	Q8N7C7	305 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	GPR32P1	Q8NGA4	272 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	PIGX	Q8TBF5	258 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC35B4	Q969S0	331 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	SLC47A1	Q96FL8	570 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ZNF300	Q96RE9	604 aa	Predicted RBP	11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	MED18	Q9BUE0	208 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	EVA1A	Q9H8M9	152 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	SPAG4	Q9NPE6	437 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	FANCF	Q9NPI8	374 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	ARL8B	Q9NVJ2	186 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	EMC3	Q9P0I2	261 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	BAG5	Q9UL15	447 aa		11.29	□□□□□ -0.6
FDPS-204	ENST00000461507	PRR14L	Q5THK1	2151 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	CXCR6	O00574	342 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	CYTIP	O60759	359 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	GCM2	O75603	506 aa	Predicted RBP	11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	AKR7A3	O95154	331 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	LGI1	O95970	557 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	YES1	P07947	543 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	PNMT	P11086	282 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	IMPDH2	P12268	514 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	NCK1	P16333	377 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	HOXB4	P17483	251 aa	Predicted RBP	11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	MAP2K6	P52564	334 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	VEZF1	Q14119	521 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	CYBRD1	Q53TN4	286 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	ENTPD8	Q5MY95	495 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	SHE	Q5VZ18	495 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	ULK3	Q6PHR2	472 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	HACD2	Q6Y1H2	254 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	C20orf204	Q6ZNR8	217 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	C22orf34	Q6ZV56	151 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	NUFIP2	Q7Z417	695 aa	Known RBP	11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	BIVM	Q86UB2	503 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	RBM45	Q8IUH3	476 aa	Known RBP	11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	CCDC103	Q8IW40	242 aa		11.28	□□□□□ -0.6
FDPS-204	ENST00000461507	UBE2J2	Q8N2K1	259 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms