RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 OTUD3Q5T2D3 398 aaPredicted RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 TYW3Q6IPR3 259 aaKnown RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 SHQ1Q6PI26 577 aaKnown RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 CLEC4FQ8N1N0 589 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 LRRC17Q8N6Y2 441 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 YIPF5Q969M3 257 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 MOAP1Q96BY2 351 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 ANKRD27Q96NW4 1050 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 ALKBH3Q96Q83 286 aaPredicted RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 JMJD8Q96S16 334 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 SLC6A7Q99884 636 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 NAA11Q9BSU3 229 aaPredicted RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 SF3B5Q9BWJ5 86 aaKnown RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 TMPRSS13Q9BYE2 586 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 EXOSC3Q9NQT5 275 aaKnown RBP10.2□□□□□ -0.78
HCFC1-204ENST00000461098 PCDHGB4Q9UN71 923 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 SLC35A3Q9Y2D2 325 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 TMED7Q9Y3B3 224 aa10.2□□□□□ -0.78
HCFC1-204ENST00000461098 EXOC1LA0A1B0GW35 172 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 LIPT2A6NK58 231 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 AQP7P3A6NL99 342 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 AZIN1O14977 448 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 SKAP2O75563 359 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 AKR7A3O95154 331 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 AK1P00568 194 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 TFP02787 698 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 GUSBP08236 651 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 HKR1P10072 659 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 SAGP10523 405 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 CBR1P16152 277 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 HPCAL1P37235 193 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 GPR6P46095 362 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 UBE2NP61088 152 aaKnown RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 ETF1P62495 437 aaKnown RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 MIDNQ504T8 468 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 KANK2Q63ZY3 851 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 C6orf120Q7Z4R8 191 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 ABHD12BQ7Z5M8 362 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 HMGN2P46Q86SG4 172 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 RIMKLAQ8IXN7 391 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 KRTCAP2Q8N6L1 136 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 OR51F2Q8NH61 342 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 ACMSDQ8TDX5 336 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 PMM1Q92871 262 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 DDIT4LQ96D03 193 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 ZNF317Q96PQ6 595 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 MRPL37Q9BZE1 423 aaKnown RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 PIF1Q9H611 641 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 DYNLRB1Q9NP97 96 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 ZNF275Q9NSD4 429 aaPredicted RBP10.19□□□□□ -0.78
HCFC1-204ENST00000461098 OXSMQ9NWU1 459 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 DCDC2Q9UHG0 476 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 PYCARDQ9ULZ3 195 aa10.19□□□□□ -0.78
HCFC1-204ENST00000461098 TRAV20A0A0B4J274 112 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 A0A1W2PPM1 405 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 PRAMEF27A3QJZ7 478 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 OR6C65A6NJZ3 312 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 DUXAA6NLW8 204 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 TMEM233B4DJY2 109 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 ZNF587BE7ETH6 402 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 RP2O75695 350 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
HCFC1-204ENST00000461098 ACHEP22303 614 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 TACR3P29371 465 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 HTR3AP46098 478 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 EVX1P49640 407 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 POLR2HP52434 150 aaKnown RBP10.18□□□□□ -0.78
HCFC1-204ENST00000461098 KCNJ10P78508 379 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 CEACAM7Q14002 265 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 LSM12Q3MHD2 195 aaKnown RBP10.18□□□□□ -0.78
HCFC1-204ENST00000461098 SLC9B1Q4ZJI4 515 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 CFAP157Q5JU67 520 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 C8orf74Q6P047 294 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 FRRS1Q6ZNA5 592 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 CREB3L2Q70SY1 520 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 C1QL2Q7Z5L3 287 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 EPHX4Q8IUS5 362 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 MIPOL1Q8TD10 442 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 OIT3Q8WWZ8 545 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 CNOT9Q92600 299 aaKnown RBP10.18□□□□□ -0.78
HCFC1-204ENST00000461098 MRPL24Q96A35 216 aaKnown RBP10.18□□□□□ -0.78
HCFC1-204ENST00000461098 FMO2Q99518 471 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 SUCNR1Q9BXA5 334 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 OR51I1Q9H343 314 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 NOX3Q9HBY0 568 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 REV1Q9UBZ9 1251 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 FIS1Q9Y3D6 152 aa10.18□□□□□ -0.78
HCFC1-204ENST00000461098 KMT2CQ8NEZ4 4911 aaKnown RBP10.17□□□□□ -0.78
HCFC1-204ENST00000461098 RPL36A-HNRNPH2H7BZ11 118 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 SYNGR3O43761 229 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 PLIN3O60664 434 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 NCR1O76036 304 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 FSHBP01225 129 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 ADRA2CP18825 462 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 TCN1P20061 433 aaPredicted RBP10.17□□□□□ -0.78
HCFC1-204ENST00000461098 NR4A1P22736 598 aa10.17□□□□□ -0.78
HCFC1-204ENST00000461098 RPL3P39023 403 aaKnown RBP10.17□□□□□ -0.78
HCFC1-204ENST00000461098 SEC24CP53992 1094 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms